Rhodococcoides fascians D188: A3L23_03945
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Entry
A3L23_03945 CDS
T04328
Symbol
pbpB
Name
(GenBank) Penicillin-binding protein PbpB
KO
K03587
cell division protein FtsI (penicillin-binding protein 3) [EC:
3.4.16.4
]
Organism
rfa
Rhodococcoides fascians D188
Pathway
rfa00550
Peptidoglycan biosynthesis
rfa01100
Metabolic pathways
rfa01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
rfa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
A3L23_03945 (pbpB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
A3L23_03945 (pbpB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rfa01011
]
A3L23_03945 (pbpB)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rfa03036
]
A3L23_03945 (pbpB)
Enzymes [BR:
rfa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
A3L23_03945 (pbpB)
Peptidoglycan biosynthesis and degradation proteins [BR:
rfa01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
A3L23_03945 (pbpB)
Chromosome and associated proteins [BR:
rfa03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
A3L23_03945 (pbpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
AMY55258
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All DBs
Position
4123344..4125101
Genome browser
AA seq
585 aa
AA seq
DB search
MYVALAVVAAQLLWIQGFDAPTLSAESASQRTTTLVDPAMRGSILDRNGNPIAFTMEAKA
LTFQPVRVRRELDEARAKDPTKPETDKYLDDIAERIHSDLGDVVSKKDLLAKLKSNDEFT
YLARGVDATVASNISKEFKQVGLERQDIREYPGGSLAANIVGATGWDGHGLLGLEDSLDA
TLAGTDGSQTYDRGSDGAVIPGSWRDKQPAVNGSNVELTIDADLQYYVQQQVQLAKDLSG
AKNASAYVQDSHTGEVLAMSNDNTFNPGIGVGNNERTKEMGNLPVTTPFEPGSVNKIITA
AAAIEYGLTTPDEVLQVPGNIFMSGVSVRDAWEHGVAPYTSTGVFGKSSNVGTLMLAQRV
GEDRYADMLNKFGLGQRSDVGLPNESAGSVPSRDQWSGGTFANLPIGQGLSMTLLQMTGM
YQAIANDGVRIPPRIVAATVDANGERTETPRPDGVYVVSPDTAKTVRNMFRSVTQDDTGN
QRGTGVAAGVEGYQISGKTGTAQQVDPECKCYSNSKYWITFAGIAPADDPRYVIGIMLDA
PSRSADGSGGQSAAPLFHNIASWLLQRDSVPMSADPGPKLVLQAD
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgtacgtggctttggcggtcgtcgcggcacagttgctctggattcaaggattcgatgcg
ccgacactgtcggccgagtccgcctcgcagcgcaccaccaccctcgtcgatccggcgatg
cgcggctcgatcctcgatcgcaacggaaacccgatcgctttcaccatggaagcgaaagcg
ctgacgttccagccggtccgggttcgtagagaactcgacgaggcacgcgcgaaggatccg
acgaagccggaaaccgacaagtacctcgacgacatcgccgagcggatccacagcgatctc
ggtgacgtcgtcagcaagaaggatctgctcgcgaaactgaagagcaacgacgaattcacc
tatctggcacggggtgtggacgccaccgtggcgtcgaacatcagcaaggaattcaagcag
gtcgggctcgaacgtcaggacatccgcgagtacccgggtggctcgctcgccgcgaacatc
gtcggggccaccgggtgggacggacacggcctgctcgggctcgaggattcgctcgacgcc
acgctcgccggtaccgacggatcgcagacctacgatcgcggttccgacggggccgtcatt
cccggcagctggcgcgacaagcagcccgcggtcaacggctcgaacgtggaactgaccatc
gacgcggacctgcagtactacgtacagcagcaggtgcagctggcgaaagatctgtccggg
gccaagaatgcgtctgcctacgttcaggattcgcacaccggcgaagtgctggccatgtcg
aacgacaacaccttcaaccccggaatcggcgtcggaaacaacgaacggaccaaggagatg
ggcaatctgcccgtcacgacgccgttcgagcccggttcggtcaacaagatcatcactgct
gcagccgctatcgagtacgggctcaccacacccgacgaggtgctgcaggtaccgggcaac
atcttcatgtccggtgtctcggtccgggacgcctgggaacacggagttgcgccgtacacc
tccaccggagtgttcggtaagtcctccaacgtggggactctgatgctggctcaacgtgtc
ggcgaggatcggtatgccgacatgctgaacaagttcggcctgggccagcgcagcgacgtc
ggcctccccaacgagagcgcaggcagcgtgcccagccgcgatcagtggtcgggcggtacc
ttcgccaacctgccgatcgggcagggtctgtcgatgacgctcctgcagatgaccgggatg
taccaggcgatcgccaacgacggtgtgcgcatcccgccgcggatcgtcgcggcaacggtg
gacgccaacggcgaacgaaccgagacgccgcgacccgacggggtgtacgtggtcagtccc
gatacggcgaagacggtccgcaacatgttccggtcggtcacccaggacgacactggaaat
cagcgcggtaccggagtcgccgcaggtgtcgagggctaccagatcagtggtaagaccggc
acggcccagcaggtcgatcccgagtgcaagtgctactcgaactcgaagtactggatcacg
ttcgcgggtatcgctccggcagacgatcctcgctacgtgatcgggatcatgctggacgcg
ccgtcccgcagcgccgacggctcgggagggcagtcggccgcaccgctgttccacaacatc
gccagctggctgttgcagcgcgacagtgttccgatgtccgcagacccgggccccaagttg
gttcttcaggccgactga
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