KEGG   Rhodococcoides fascians D188: A3L23_04062
Entry
A3L23_04062       CDS       T04328                                 
Symbol
uvrA_3
Name
(GenBank) UvrABC system protein A
  KO
K03701  excinuclease ABC subunit A
Organism
rfa  Rhodococcoides fascians D188
Pathway
rfa03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rfa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    A3L23_04062 (uvrA_3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rfa03400]
    A3L23_04062 (uvrA_3)
DNA repair and recombination proteins [BR:rfa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     A3L23_04062 (uvrA_3)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      A3L23_04062 (uvrA_3)
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran AAA_29 AAA_21 SMC_N RsgA_GTPase AAA_16 AAA_25 APS_kinase DnaJ_CXXCXGXG NACHT Viral_helicase1 ExoX-like_C ScfRs cobW NTPase_1
Other DBs
NCBI-ProteinID: AMY55374
LinkDB
Position
4248512..4251436
AA seq 974 aa
MADRLIVRGAREHNLRGVDIDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTAH
CPVCGEQIAKQTPQQIVDQVLDMEEGLKFQVLAPVVRTRKGEFVDLFDSLNTQGYSRVRV
DGVVHQLSSPPVLKKQEKHDIEVVVDRLTVKSSSKQRLTDSVETALRLADGIVVLDFVDR
EENAPDRERRFSEKLACPNGHPLSIDDLEPRSFSFNSPYGACPDCVGLGVRKEVDPELVV
PDGDLSLADGAIAPWSMGQTSEYFGRLLSGLADAMGFDLHAPWNKLPAKVKRAVLEGSDH
QVHVKYKNRYGRTRSYYAEFEGVMPFLHRRLEQTESEQMKERYDGYMRDVPCPTCNGARL
RPEILSVTIAAGDFGPKSIAEVCELSIADTADFLNSLTLGRREEAIAGQVLKEVQARLGF
LLDVGLEYLSLARTAGSLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRRLID
TLTRLRDLGNTLIVVEHDEDTIRTSDWVVDIGPLAGEHGGRVVHSGSYADLLTNDESLTG
AYLSGRMEIPLPDTRRVVDKKRQVTVVGAREHNLQGIDVSFPLGVLTSVTGVSGSGKSTL
VNDILATVMANKLNGARQVPGRHTRINGLDQLDKLVRVDQSPIGRTPRSNAATYTGVFDK
IRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACSGDGTLKIEMNFLPDVYVPCEVCEGAR
YNRETLEVHYKGKTIAEVLDMPIEEAADFFEAITSIHRYLKTLVEVGLGYVRLGQPATTL
SGGEAQRVKLAAELQKRSTGRTVYILDEPTTGLHFEDIRKLLGVVNGLVDKGNTVIVIEH
NLDVIKVSDWVIDMGPEGGSGGGTVVAQGNPEAVAAVPESYTGKFLQEALSREVVASTPK
AAPKKRRARKVAAV
NT seq 2925 nt   +upstreamnt  +downstreamnt
gtggcggatcgcctgatagtgcgaggtgcacgggagcacaacttgaggggggtcgatatc
gacctgccccgggacgcgctgatcgtgttcaccggtttgtccggttcgggcaagtcgtct
ctcgccttcgacacgatcttcgccgaaggccagcgccgctacgtggagtcgctgtccgca
tacgcacggcagttcctcgggcagatggacaagcccgacgtcgacttcatcgaaggcctg
tcgcccgcggtctcgatcgaccagaagtcgaccaaccgcaacccacgctccaccgtgggc
accatcaccgaggtatacgactacctacggttgctctacgccagggcgggcactgcgcac
tgcccggtgtgcggggagcagatcgccaagcagactccacagcagatcgtcgatcaggtt
ctcgacatggaggagggcctcaaattccaggtcctcgcgccggtggtccgaacccgtaag
ggcgagttcgtcgacctgttcgactcgctcaacactcagggctactcacgtgtgcgcgtc
gacggtgtcgtccaccagctcagcagcccgccggtgttgaagaagcaggaaaagcacgac
atcgaggtcgtcgtcgaccgactcacggtcaagtccagctcgaagcagcggctcaccgac
tcggtggagaccgcactgcggctcgcggacggcatcgtggttctcgacttcgtcgaccgt
gaggagaacgcccccgatcgggagcgtcgtttctcggagaagctcgcgtgccccaacggc
cacccgctgtccatcgacgacctcgaaccgcgatcgttctcgttcaactcgccttacggc
gcctgccccgactgtgtcgggctcggcgtgcgcaaggaggtcgatcccgagctggtggtg
cccgacggtgatctgagtctggccgacggtgccatcgcgccctggtcgatgggccagacg
tcggagtacttcggtcgcttgctgtccggactcgccgacgccatgggcttcgatctgcac
gctccgtggaacaagctgccggcgaaggtcaagcgagctgtcctggagggcagcgaccac
caggtgcacgtgaagtacaagaaccggtacggccgcacccggtcgtactacgccgagttc
gagggcgtcatgcccttcctgcaccgccgcctcgagcagaccgaatccgaacagatgaag
gaacgctacgacggctacatgcgcgacgttccgtgtcctacctgcaacggagccaggctg
cgtccggaaattctgtcggtcaccatcgcggcgggtgatttcgggccgaagtcgatcgcc
gaggtgtgtgaactgtccatcgccgacacggccgacttcctcaacagcctcactctgggg
cgacgcgaggaagcgatcgcgggccaggtcctcaaggaggtgcaggctcgactcggcttc
ctgctggacgtgggtctcgaatacctgtcgttggcgcgcaccgcgggctcgctgtccggc
ggcgaggcccaacgtatccggctcgccacgcagatcggctccggcctcgtcggcgtgctc
tacgtactggacgagccgtccatcggactgcatcaacgggacaaccgccggctcatcgac
acgctgacgcgactgcgcgatctcggcaacacgttgatcgtcgtcgagcacgacgaggac
accatccgtacctcggactgggtcgtcgatatcggaccgctggccggtgagcacggcgga
cgcgtcgtgcacagcggttcctacgcggacctgctgaccaacgacgaatcgctcacgggt
gcgtatctgtcgggtcgcatggagatcccgttgccggacacccgccgggtggtcgacaag
aagcgacaggtcaccgtcgtgggtgcccgtgaacacaacctccagggaatcgacgtcagc
ttccccctcggtgttctgacgtcggtcaccggtgtctccggctcgggcaagtcgactctg
gtcaacgacatccttgcgaccgtgatggccaacaagctcaacggtgcccggcaggttccc
ggtcggcacacccggatcaacggtctcgaccaactggacaagctggttcgcgtcgaccag
tcaccgatcggccgcacgccccggtccaacgccgcgacgtacaccggggtgttcgacaag
atccgtacgttgttcgcggccaccaccgaggccaaggttcgtgggtatcagcccgggcga
ttctcgttcaacgtcaagggcggtcggtgcgaggcatgctcgggagacggcacgttgaag
atcgagatgaacttcctgcccgacgtctacgtcccctgcgaggtgtgcgaaggcgctcgc
tacaaccgcgagacgctcgaagtgcactacaagggcaagaccatcgccgaggtcctggac
atgccgatcgaggaggctgccgacttcttcgaggccatcacgtcgattcaccggtacctc
aagacactcgtcgaggtcggcctcggttacgtccgcctggggcaaccggcgacgacactg
tccggcggcgaagctcagcgtgtgaaactcgcagccgagttgcagaagcgatcgaccggc
cgcaccgtctacattctcgacgagccgaccacgggcctgcatttcgaggacatccggaag
ttgctcggagtggtgaacggactcgtcgacaaggggaacaccgtgattgtcatcgagcac
aatctcgatgtcatcaaggtctccgactgggtcatcgacatggggcccgaaggtggttcg
ggcggcggaacggttgtggcgcagggtaatccggaagccgtagcagcggtgcccgaaagc
tacaccggaaaattcctgcaggaggcgctctcccgcgaggtagtggcgtccacgccgaag
gcggccccgaagaagcgtcgggctcgtaaggtcgctgcggtctga

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