Entry |
|
Symbol |
uvrA_3
|
Name |
(GenBank) UvrABC system protein A
|
KO |
K03701 | excinuclease ABC subunit A |
|
Organism |
rfa Rhodococcoides fascians D188
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:rfa00001]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A3L23_04062 (uvrA_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:rfa03400]
A3L23_04062 (uvrA_3)
DNA repair and recombination proteins [BR:rfa03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A3L23_04062 (uvrA_3)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A3L23_04062 (uvrA_3)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
4248512..4251436
|
AA seq |
974 aa
MADRLIVRGAREHNLRGVDIDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTAH
CPVCGEQIAKQTPQQIVDQVLDMEEGLKFQVLAPVVRTRKGEFVDLFDSLNTQGYSRVRV
DGVVHQLSSPPVLKKQEKHDIEVVVDRLTVKSSSKQRLTDSVETALRLADGIVVLDFVDR
EENAPDRERRFSEKLACPNGHPLSIDDLEPRSFSFNSPYGACPDCVGLGVRKEVDPELVV
PDGDLSLADGAIAPWSMGQTSEYFGRLLSGLADAMGFDLHAPWNKLPAKVKRAVLEGSDH
QVHVKYKNRYGRTRSYYAEFEGVMPFLHRRLEQTESEQMKERYDGYMRDVPCPTCNGARL
RPEILSVTIAAGDFGPKSIAEVCELSIADTADFLNSLTLGRREEAIAGQVLKEVQARLGF
LLDVGLEYLSLARTAGSLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRRLID
TLTRLRDLGNTLIVVEHDEDTIRTSDWVVDIGPLAGEHGGRVVHSGSYADLLTNDESLTG
AYLSGRMEIPLPDTRRVVDKKRQVTVVGAREHNLQGIDVSFPLGVLTSVTGVSGSGKSTL
VNDILATVMANKLNGARQVPGRHTRINGLDQLDKLVRVDQSPIGRTPRSNAATYTGVFDK
IRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACSGDGTLKIEMNFLPDVYVPCEVCEGAR
YNRETLEVHYKGKTIAEVLDMPIEEAADFFEAITSIHRYLKTLVEVGLGYVRLGQPATTL
SGGEAQRVKLAAELQKRSTGRTVYILDEPTTGLHFEDIRKLLGVVNGLVDKGNTVIVIEH
NLDVIKVSDWVIDMGPEGGSGGGTVVAQGNPEAVAAVPESYTGKFLQEALSREVVASTPK
AAPKKRRARKVAAV |
NT seq |
2925 nt +upstreamnt +downstreamnt
gtggcggatcgcctgatagtgcgaggtgcacgggagcacaacttgaggggggtcgatatc
gacctgccccgggacgcgctgatcgtgttcaccggtttgtccggttcgggcaagtcgtct
ctcgccttcgacacgatcttcgccgaaggccagcgccgctacgtggagtcgctgtccgca
tacgcacggcagttcctcgggcagatggacaagcccgacgtcgacttcatcgaaggcctg
tcgcccgcggtctcgatcgaccagaagtcgaccaaccgcaacccacgctccaccgtgggc
accatcaccgaggtatacgactacctacggttgctctacgccagggcgggcactgcgcac
tgcccggtgtgcggggagcagatcgccaagcagactccacagcagatcgtcgatcaggtt
ctcgacatggaggagggcctcaaattccaggtcctcgcgccggtggtccgaacccgtaag
ggcgagttcgtcgacctgttcgactcgctcaacactcagggctactcacgtgtgcgcgtc
gacggtgtcgtccaccagctcagcagcccgccggtgttgaagaagcaggaaaagcacgac
atcgaggtcgtcgtcgaccgactcacggtcaagtccagctcgaagcagcggctcaccgac
tcggtggagaccgcactgcggctcgcggacggcatcgtggttctcgacttcgtcgaccgt
gaggagaacgcccccgatcgggagcgtcgtttctcggagaagctcgcgtgccccaacggc
cacccgctgtccatcgacgacctcgaaccgcgatcgttctcgttcaactcgccttacggc
gcctgccccgactgtgtcgggctcggcgtgcgcaaggaggtcgatcccgagctggtggtg
cccgacggtgatctgagtctggccgacggtgccatcgcgccctggtcgatgggccagacg
tcggagtacttcggtcgcttgctgtccggactcgccgacgccatgggcttcgatctgcac
gctccgtggaacaagctgccggcgaaggtcaagcgagctgtcctggagggcagcgaccac
caggtgcacgtgaagtacaagaaccggtacggccgcacccggtcgtactacgccgagttc
gagggcgtcatgcccttcctgcaccgccgcctcgagcagaccgaatccgaacagatgaag
gaacgctacgacggctacatgcgcgacgttccgtgtcctacctgcaacggagccaggctg
cgtccggaaattctgtcggtcaccatcgcggcgggtgatttcgggccgaagtcgatcgcc
gaggtgtgtgaactgtccatcgccgacacggccgacttcctcaacagcctcactctgggg
cgacgcgaggaagcgatcgcgggccaggtcctcaaggaggtgcaggctcgactcggcttc
ctgctggacgtgggtctcgaatacctgtcgttggcgcgcaccgcgggctcgctgtccggc
ggcgaggcccaacgtatccggctcgccacgcagatcggctccggcctcgtcggcgtgctc
tacgtactggacgagccgtccatcggactgcatcaacgggacaaccgccggctcatcgac
acgctgacgcgactgcgcgatctcggcaacacgttgatcgtcgtcgagcacgacgaggac
accatccgtacctcggactgggtcgtcgatatcggaccgctggccggtgagcacggcgga
cgcgtcgtgcacagcggttcctacgcggacctgctgaccaacgacgaatcgctcacgggt
gcgtatctgtcgggtcgcatggagatcccgttgccggacacccgccgggtggtcgacaag
aagcgacaggtcaccgtcgtgggtgcccgtgaacacaacctccagggaatcgacgtcagc
ttccccctcggtgttctgacgtcggtcaccggtgtctccggctcgggcaagtcgactctg
gtcaacgacatccttgcgaccgtgatggccaacaagctcaacggtgcccggcaggttccc
ggtcggcacacccggatcaacggtctcgaccaactggacaagctggttcgcgtcgaccag
tcaccgatcggccgcacgccccggtccaacgccgcgacgtacaccggggtgttcgacaag
atccgtacgttgttcgcggccaccaccgaggccaaggttcgtgggtatcagcccgggcga
ttctcgttcaacgtcaagggcggtcggtgcgaggcatgctcgggagacggcacgttgaag
atcgagatgaacttcctgcccgacgtctacgtcccctgcgaggtgtgcgaaggcgctcgc
tacaaccgcgagacgctcgaagtgcactacaagggcaagaccatcgccgaggtcctggac
atgccgatcgaggaggctgccgacttcttcgaggccatcacgtcgattcaccggtacctc
aagacactcgtcgaggtcggcctcggttacgtccgcctggggcaaccggcgacgacactg
tccggcggcgaagctcagcgtgtgaaactcgcagccgagttgcagaagcgatcgaccggc
cgcaccgtctacattctcgacgagccgaccacgggcctgcatttcgaggacatccggaag
ttgctcggagtggtgaacggactcgtcgacaaggggaacaccgtgattgtcatcgagcac
aatctcgatgtcatcaaggtctccgactgggtcatcgacatggggcccgaaggtggttcg
ggcggcggaacggttgtggcgcagggtaatccggaagccgtagcagcggtgcccgaaagc
tacaccggaaaattcctgcaggaggcgctctcccgcgaggtagtggcgtccacgccgaag
gcggccccgaagaagcgtcgggctcgtaaggtcgctgcggtctga |