Rhodococcoides fascians D188: A3L23_04093
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Entry
A3L23_04093 CDS
T04328
Symbol
recN
Name
(GenBank) DNA repair protein RecN
KO
K03631
DNA repair protein RecN (Recombination protein N)
Organism
rfa
Rhodococcoides fascians D188
Brite
KEGG Orthology (KO) [BR:
rfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rfa03400
]
A3L23_04093 (recN)
DNA repair and recombination proteins [BR:
rfa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
A3L23_04093 (recN)
TLS (translesion DNA synthesis) factors
Other SOS response factors
A3L23_04093 (recN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_22
AAA_21
ABC_tran
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AMY55402
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Position
4284383..4286152
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AA seq
589 aa
AA seq
DB search
MLEEIRIDSLGVISGASAQFHEGLTVLTGETGAGKTMVVTSLHLLSGARADAGRVRLGAQ
RAVVEGRFSTDTASEQVIEDVEKVLESSGGQRDEDNSIIAVRTVNLDGRSRAHLGGRSVP
ASVLSNFTDSLLTVHGQNDQLRLLRPDQQLGALDRFAGDSVASLVAKYRAARKTWLDARN
ELIDRTERSRELAQEADRLQFGLQEIDSLAPEPGEDRSVAEDVRRLGDLDSLRETAEGAA
AALVGSTEEASDTTSALYLLGEARSRLEHADDAALTELLPRLNDAMAVVGDIGADLTSYL
SDLPSDPGALDTILNRQAELKSLTRKYAADVDGVIAWAEDARERLSRIDTSADALAELSA
RVESAAVDVAAAASKLSAARSKAATKLSKAVSVELAGLAMGKAKLQIDVRSLPAGPSDTA
PIVVDGTELHAGSTGVDEVEFRLSAHDGAQALPISKSASGGELSRVMLALEVVLAGSDKG
ATMVFDEVDAGVGGRAAVEVGRRLGRLARTHQVIVVTHLPQVAAFADTHLVVDKTDAKKG
AANSGVRTLSSSERVVELARMLAGLDDTETGRAHAEELLATANADRAAL
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaagagattcggatcgacagcctcggagtcatctccggtgcgagcgcacaattt
cacgaggggttgacggttctcaccggcgagaccggggccggcaagacgatggtggtcacc
agcttgcatctgctgtcgggtgcacgcgccgatgcaggtcgggtgcggctcggtgcccaa
agggccgtggtcgagggtcgattcagcaccgacaccgcctcggaacaggtgatcgaggat
gtcgagaaggtgctcgaatcctcgggaggtcaacgcgacgaagacaattcgatcatcgcc
gtgcgaacggtcaatttggacggccgctcacgtgcacatctgggtggacgaagcgtcccc
gcatcggtgctgtcgaacttcaccgattcgctgctgacagtgcacggccagaacgatcag
ttgcggctactgcgccccgatcagcaactcggtgcactcgacagattcgccggtgattcg
gtggcctctctggtggcgaagtatcgcgccgcccgtaagacgtggctcgacgcacgcaac
gaattgatcgaccgcaccgaacgcagccgtgaattggctcaggaagcggaccggctgcag
ttcggcctgcaggagatcgactccctggcaccggagccgggtgaggatcgctccgtggcc
gaggatgtgcgcaggctcggcgacctcgattcgctgcgggaaacggccgagggtgccgcc
gcggctctcgtcgggagtaccgaggaggcgtcggacaccacgtctgcgctgtatctgctg
ggcgaggcacgatcgcgtctcgaacacgccgacgatgctgctctcacagaactgctgccc
cggttgaacgacgcgatggccgtcgtcggcgacatcggtgccgatctgacctcgtatctg
tcggacctcccgtcggatccgggagctctcgacacgatcctgaaccggcaggccgagctg
aagtctttgacgcgcaagtacgccgccgacgtcgacggcgtcatcgcgtgggccgaggac
gctcgggaacgtctgtctcgcatcgatacctctgccgacgcgctcgcggagctgagtgcg
cgtgtcgagtcggctgctgtcgacgtcgcggcggccgcgtccaagctgagcgctgcccgg
tcgaaagcggcgacgaagctgtccaaagccgtcagcgtcgagctggccggactggcgatg
ggaaaagccaagctgcagatagatgttcgatcgctgccggccggaccgtcggacacggca
ccgatcgtcgtcgacggtaccgagttgcatgcgggtagtaccggggtcgacgaggtcgag
ttccggttgtccgcgcacgacggagcccaggcgttgccgatcagcaagagcgcctcgggc
ggtgagctgtcgcgggtcatgttggcgctcgaggtggtgctggcgggctcggacaaggga
gcgacaatggtgttcgacgaggtcgacgccggagtcggtggtcgggcggcggtcgaggtc
ggtcgtcggctcggtcggctggctcgtactcatcaggtcatcgtcgtcacccacctgccg
caggtggctgcgttcgcggacacgcatctggtggtggacaagaccgacgccaagaagggg
gcggcgaacagcggagtccggacgctgtcgtcctcggaacgcgtcgtcgaactcgcccgg
atgctcgccgggctcgacgacaccgagaccggtcgcgcacacgcagaggagctgttggcc
accgcaaacgcggatcgagctgccctgtaa
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