Rhodococcoides fascians D188: A3L23_04102
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Entry
A3L23_04102 CDS
T04328
Name
(GenBank) putative RNA pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
rfa
Rhodococcoides fascians D188
Brite
KEGG Orthology (KO) [BR:
rfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rfa03009
]
A3L23_04102
Enzymes [BR:
rfa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
A3L23_04102
Ribosome biogenesis [BR:
rfa03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
A3L23_04102
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
S4_2
DUF2868
Motif
Other DBs
NCBI-ProteinID:
AMY55411
LinkDB
All DBs
Position
4294461..4295642
Genome browser
AA seq
393 aa
AA seq
DB search
MNKPARRDGTPDRNKRQDPRRKPTAGRSDTPRDARRGDRTRDAAPRDGAPRAGAPRTGAP
RTGGPRAGAPRTGGRPAPRRGVEQGESFENKPVETGINDRSNDAVPRKKPSRPKPPKPQK
KQAPATTISNAKPAKHQYTDSSPRKHVPAGEGVRLQKVLAQAGVASRRAAEELIADGRVE
VDGRIVTEQGIRIDPNIAVVRVDGTRVVVKEELVHLAMNKPRGWQCTMSDDLGRPCVGDI
VAERVQAGQRLFHVGRLDADTEGLLLFTNDGDLAHRLMHPSYEVSKTYLATLFGTIPRTL
GKQLREGVTLDDGPVKVDGFQLLDISDGKSLVKVTLHEGRKHIVRRLFDKVGFPVGRLVR
TDVGNIVLGDQRPGTLRVLGRGEIGKLYESVGL
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagcccgctcgccgtgatggcacaccggaccgtaacaagagacaagacccacgc
aggaagcccaccgcaggtcggtcggacaccccgcgtgacgcacgccgcggagatcgcacc
cgcgacgccgcaccccgggacggcgctccccgcgctggtgcaccccgcaccggtgcccct
cgcaccgggggaccccgcgcaggcgctccccgcaccggtggccgaccggccccgcgcaga
ggcgtcgagcagggggaatcgttcgagaacaagcccgtcgagacgggcatcaacgatcgc
agcaacgacgcggtgccccgcaagaagccgtcgcgccccaagccgccgaagccgcagaag
aagcaggctccggcgaccaccatcagcaacgccaagccggcgaagcatcagtacaccgat
tcgtccccgcgcaagcacgtgcctgccggtgagggtgttcggttgcagaaggtgctcgcg
caggccggtgtcgcgtcgcgtcgggccgcggaagagctgatcgccgacggtcgcgtcgag
gtggacggacgcatcgtcaccgagcagggcatccgcatcgatccgaacatcgccgtcgtt
cgcgtcgacggcactcgtgtcgtcgtgaaggaagaactggttcatctcgcgatgaacaag
ccgcgcggatggcagtgcaccatgtcggacgatctgggtcgtccgtgcgtcggcgacatc
gtcgccgagcgcgtgcaggcgggccagcgtctgttccacgtcggtcggctcgatgccgac
accgagggactgttgttgttcaccaacgacggtgaccttgctcaccggctgatgcacccg
tcgtacgaggtgtccaagacatatctcgcgacgctgttcggcacgattccccgcacgctc
ggcaagcagttgcgcgaaggcgtcactctcgacgacggcccggtgaaggtcgacggcttc
cagctgctcgatatctcggacggcaaatcgctcgtcaaggtgacgttgcacgagggccgc
aagcacatcgtgcgtcggttgttcgacaaggtcggattcccggtgggacgcctcgtgcgt
accgacgtcggcaacatcgtgctcggcgatcagcgtcccggaacactgcgtgttctcggc
cgcggcgagatcggcaagctctacgaatccgtaggcctgtga
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