Rhodococcoides fascians D188: A3L23_04419
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Entry
A3L23_04419 CDS
T04328
Symbol
pdxS
Name
(GenBank) Pyridoxal 5'-phosphate synthase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
rfa
Rhodococcoides fascians D188
Pathway
rfa00750
Vitamin B6 metabolism
rfa01100
Metabolic pathways
rfa01240
Biosynthesis of cofactors
Module
rfa_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
rfa00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
A3L23_04419 (pdxS)
Enzymes [BR:
rfa01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
A3L23_04419 (pdxS)
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Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
His_biosynth
Dus
NanE
NMO
IGPS
TetR_C_27
OMPdecase
Glu_synthase
FMN_dh
DHO_dh
5-nucleotidase
Motif
Other DBs
NCBI-ProteinID:
AMY55726
LinkDB
All DBs
Position
complement(4678775..4679725)
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AA seq
316 aa
AA seq
DB search
MSTPHAPNSPAASTGSADGGSNENGIGTARVKRGMAEMLKGGVIMDVVTADQAKIAEDAG
AVAVMALERVPADIRAQGGVSRMSDPDMIDSIISSVSIPVMAKARIGHFIEAQILQSLGV
DYIDESEVLTPADYANHIDKWNFTVPFVCGATNLGEALRRITEGAAMIRSKGEAGTGDVS
NATTHMRKIRDEIRRLTSLPEDELYVAAKELQAPYDLVVEIARAGKLPVTLFTAGGIATP
ADAAMMMQLGAEGVFVGSGIFKSGNPKERAEAIVKATTFFDDPDVLAKVSRGLGEAMVGI
NVDDLPVAHRLAERGW
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
ttgagtaccccacacgcccccaattcgcccgctgcttccactggatccgctgacggcggg
tccaacgagaacggaatcggcaccgctcgcgtcaagcgcggtatggccgagatgctcaag
ggcggcgtcatcatggacgtggtcaccgcagaccaggcgaagatcgccgaggatgccggt
gccgttgccgtcatggcgctcgagcgcgttcccgccgacatccgcgcgcagggcggggtg
tcgcggatgagcgatccggacatgatcgacagcatcatctcctcggtcagcattccggtg
atggccaaggcccgcatcgggcacttcatcgaggcgcagatcctgcagagcctgggtgtc
gactacatcgacgagtccgaggtcctcaccccggccgactacgccaatcacatcgacaag
tggaatttcaccgttccgttcgtgtgtggtgccaccaacctgggtgaagcactgcgtcga
attaccgagggcgcagccatgattcgctccaagggcgaggccggcaccggcgacgtctcg
aacgcgacgacccacatgcgcaagattcgcgacgagattcgccgtctcacatcacttccc
gaagacgagctgtacgtcgcggcgaaggaactgcaggctccgtacgatctcgtcgtcgag
atcgcccgtgccggaaagctgcccgtcacgttgttcaccgccggcggcatcgccaccccg
gccgacgcggcgatgatgatgcaactcggtgccgagggagtgttcgtcggatcgggaatc
ttcaagtccggcaacccgaaagaacgtgccgaggcaatcgtcaaggccactaccttcttc
gacgacccggatgtcctcgccaaggtctcccgtggactcggcgaggcgatggtcggcatc
aacgtcgacgacctgcccgtcgcgcaccggctcgccgagcgcggttggtga
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