Rhodococcoides fascians D188: A3L23_04603
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Entry
A3L23_04603 CDS
T04328
Symbol
ideR_2
Name
(GenBank) Iron-dependent repressor IdeR
KO
K03709
DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
Organism
rfa
Rhodococcoides fascians D188
Brite
KEGG Orthology (KO) [BR:
rfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rfa03000
]
A3L23_04603 (ideR_2)
Transcription factors [BR:
rfa03000
]
Prokaryotic type
Helix-turn-helix
Other families
A3L23_04603 (ideR_2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fe_dep_repr_C
Fe_dep_repress
FeoA
HTH_Crp_2
GntR
HVO_A0261_N
MarR_2
HTH_24
MarR
TrmB
HTH_27
HTH_DeoR
HTH_36
HemN_C
Penicillinase_R
DUF7343
HTH_IclR
HTH_20
HTH_10
HTH_5
Rrf2
HTH_11
HTH_41
RPA_C
Put_DNA-bind_N
RP-C
HTH_CodY
HTH_AsnC-type
Ribosomal_S25
HTH_34
DnaD_N
Motif
Other DBs
NCBI-ProteinID:
AMY55906
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All DBs
Position
4864653..4865405
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AA seq
250 aa
AA seq
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MSFSIGLPKLGDVAQRKDDPAPADEGVQLSAVAQDYLKVIWTASEWSEDSVSTKMLSERI
GVSASTVSEAIRKLADQGMVDHARYGAISLTEKGRLAAIGMVRRHRLIETYLVRELGYGW
DEVHDEAEILEHAVSDLMMDRIDAKLGHPERDPHGDPIPSANGSIDTPSATRLSEYLDGQ
SGRVARISDSDPAMLRYFDSVGIELDLPITVVERRDYAGTVAIELARRGSTESIDLGHRA
AEAIWMVPAT
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgtctttttccattggattgcctaagctcggcgacgtggcgcaacgaaaagacgatcca
gctccggccgacgagggcgtacagctgtccgcagttgcgcaggactacctcaaggtcatc
tggacggccagcgaatggagtgaagactccgtcagcaccaagatgctctccgaacgaatc
ggcgtatccgcatccacggtgtccgaggcgattcgcaaactcgccgatcagggcatggtg
gaccacgcccggtacggtgccatctcactcaccgagaagggccgactggcggccatcggc
atggtccgtcgacatcgcctcatcgagacctacctcgttcgcgaactcgggtacggctgg
gacgaggtccacgacgaggcagaaatcctcgaacatgcggtatccgatctgatgatggat
cggatagacgccaaactcggccaccccgaacgagatccacacggggacccgattccgtcg
gccaacggatccatcgacacgccgtccgcaaccagactgagcgagtacctcgacggtcag
tcgggacgagtggctcgtatctccgattcggaccccgcaatgctccggtacttcgattcg
gtcggcatcgagctcgatctaccgatcaccgtggtcgaacgacgcgactacgccggcacg
gtggcgatcgaactcgcccgacgcggcagcacggagtccatcgatctcggtcaccgcgcc
gccgaagcgatctggatggttccggccacctga
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