Rhodococcoides fascians D188: A3L23_04677
Help
Entry
A3L23_04677 CDS
T04328
Symbol
rpsA_2
Name
(GenBank) 30S ribosomal protein S1
KO
K06959
protein Tex
Organism
rfa
Rhodococcoides fascians D188
Brite
KEGG Orthology (KO) [BR:
rfa00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
A3L23_04677 (rpsA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
S1_RRP5
HHH_7
YqgF
T2SSK
HHH_6
PCB_OB
PmbA_TldD_2nd
ALIX_LYPXL_bnd
Motif
Other DBs
NCBI-ProteinID:
AMY55980
LinkDB
All DBs
Position
complement(4940509..4942860)
Genome browser
AA seq
783 aa
AA seq
DB search
MTTALKSVNKRIAEELDVREEQVRAAVELLDGGSTVPFIARYRKEVTGTLDDAQLRQLDE
RLRYLRELDERRDAVIESIRSQGKLDDALEQSLMLAETKARVEDIYLPFKPKRRTKAQIA
REAGHEPVADALFTDPSTDPAQFDQEQLDGARAILVERFAEDADLVGELRELMWTSGKLV
ATVRKGKEEEGAKFSDYFEFSEPFTSLPSHRILATLRGEKEEILSLGFEPERDEPTPGVP
SVYEGRIATKFGIADRGRPADKWLLDTVRWAWRTKMLVTVSLDTRMRLRQSAEKDAVDVF
ASNLKDLLLAAPAGNRTTMGLDPGFRTGTKVAIVDATGKVVDYDTIYPHKPQGKWDRAVA
TLAGLAAKHKVELIAIGNGTASRETDSLAAELIAKFPAANLTKVVVSEAGASVYSASAYA
SSELPELDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDISETLLARSLGAVVED
AVNAVGVDVNTASVPLLSRVSGIAGSLAESIVAHRDQNGPFASRSTLKDVPRLGPKAFEQ
CAGFLRISGGEDPLDRSSVHPEAYPVVRRIVGKAGVGVREVVGNTALLRRLDPAEFVDER
FGLPTVTDIISELEKPGRDPRPEFKTATFAAGIEKVADLKPGMTLEGVVTNVAAFGAFVD
VGVHQDGLVHVSAMSHNFVKDPREVVKSGDVVRVKVMEVDIPRQRIGLSLRLDDEPGASG
GKDAPRGQQGDRSRGTSSSKGDGRQSNGGQGNRPQRDRRGGGPAATPAAGSMADALRKAG
FGK
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
gtgaccactgctctgaaatctgtgaacaagcgcatagccgaagaactcgatgttcgcgaa
gaacaggttcgtgccgctgtagaactcctcgacggcgggtccacggtcccgttcatcgcg
cgctaccgcaaggaggtcaccggcacactcgacgacgcgcaattgcgccaactcgacgag
cgacttcgatacctccgagaactcgacgagcggcgagatgccgtcatcgaatcgattcgt
tcgcagggcaaactcgacgacgcgctcgaacagtccctgatgctggccgagaccaaggcc
cgcgtcgaggacatctacctgccgttcaagcccaagcgtcggacgaaggcacagattgcg
cgcgaggccggccacgaacccgtcgcagacgcgctgttcaccgatccgtccaccgacccg
gcgcagttcgatcaggagcagctcgacggggcacgagcaattctcgtcgagcgtttcgcc
gaggatgccgacctggtgggtgagctgcgtgaactgatgtggacctccggcaagctggtc
gccaccgtgcgcaagggaaaagaggaggaaggcgcgaaattctcggactacttcgagttc
tccgaaccgttcacgagcctgccctcgcatcgcatcctcgcgacgctacgcggtgagaag
gaagagattctgtccctcgggttcgaacccgagcgggacgagccgactcccggtgtgccc
agtgtctacgaggggcgtatcgcaaccaagttcggaatcgcagatcgcggccgcccggcc
gacaagtggctgctcgataccgttcgctgggcatggcgcaccaagatgctggtcaccgtc
tcactcgatacgcgcatgagactgcgccagtcggccgagaaagacgccgtggacgtgttc
gcgagcaacctcaaagacctgttgttggccgcacccgccggaaaccgcacgacgatggga
ctcgaccccggctttcgtaccggaacgaaggtggcgatcgtcgacgccaccggcaaggtc
gtcgactacgacacgatctatccccacaagccgcagggcaagtgggaccgggcggtggcc
acactcgccgggctcgcggccaagcacaaggtggagctcatcgccatcggaaacggtacg
gcgtcacgcgaaaccgattctctggcagcagaattgattgcaaaattcccggcggcgaat
ttgaccaaggtggtggtgtccgaggcgggtgcctcggtctactcggcgtcggcgtacgcc
tcgagtgagctgcccgaactcgacgtctccatccgcggcgcggtctcgatcgctcgcagg
ctgcaggatccgttggccgagctggtcaagatcgaccccaagtccatcggtgtcggccag
taccagcacgacatctccgaaactctgctcgcccgttctctcggggccgtggtcgaggat
gcggtgaacgcggtgggtgtcgacgtcaacacagcgtcggtgcccttgctgtcgagggtc
tccggtatcgccggttcgctcgccgagagcatcgtggcgcaccgcgaccagaacggtccg
ttcgccagccgcagcaccctcaaggacgtaccgcgcttggggcccaaggctttcgagcag
tgcgccgggttcctgcgcatctccgggggagaggatccactcgaccgctccagcgtgcac
ccggaggcctatcccgtcgtgcgccgcatagtcggcaaggcaggcgtgggcgtgcgcgag
gtggtcggcaacaccgcactcctgcgccgcctcgaccccgcggaattcgtcgacgaacga
ttcgggttgcccactgtcaccgacatcatctccgagctggagaagcctggacgcgacccg
cgtccggagttcaagaccgctaccttcgcagccggtatcgagaaggtcgccgacctgaag
ccggggatgacgctcgaaggtgtcgtgacgaacgtggcggcgttcggtgctttcgtcgac
gtcggcgtgcatcaggacggactcgttcacgtctctgcgatgtcgcacaacttcgtcaag
gacccgcgtgaggtcgtcaaatccggcgatgtggtgcgggtcaaggtgatggaggtcgac
atcccacgtcagcgcatcggcctgagtctgcggttggacgacgagcccggtgcgagcggt
ggcaaggacgcacctcgtgggcagcagggtgaccgctcgcgcggtacgtcctcgagcaag
ggcgacggccgtcagagcaatggcggccagggcaaccgcccgcaacgcgaccgacgcggc
ggtggccccgcagcgacacctgcggcaggttccatggccgacgcgttgcgcaaagcgggc
ttcggaaagtag
DBGET
integrated database retrieval system
