Roseburia faecis: ACIRUI_02820
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Entry
ACIRUI_02820 CDS
T10789
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rfc Roseburia faecis
Pathway
rfc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rfc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACIRUI_02820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rfc03019
]
ACIRUI_02820
03016 Transfer RNA biogenesis [BR:
rfc03016
]
ACIRUI_02820
Enzymes [BR:
rfc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ACIRUI_02820
Messenger RNA biogenesis [BR:
rfc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACIRUI_02820
Transfer RNA biogenesis [BR:
rfc03016
]
Prokaryotic type
tRNA degradation factors
ACIRUI_02820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
KH_2
CobA_CobO_BtuR
MUG2_C
Motif
Other DBs
NCBI-ProteinID:
XKQ65883
LinkDB
All DBs
Position
559763..561859
Genome browser
AA seq
698 aa
AA seq
DB search
MYKSYSMELAGRTLTVDIGRVCAQANGAALLKYGETTVLSTATASDKPRDGVDFFPLSVE
FEEKMYSVGKIPGGFNKREGKASENSILTARVIDRPMRPLFPKDYRNDVTLNNMVMSVDP
ECRPELVAMIGAALSTTISDIPFDGPCAMTQMGMKNGEFIVNPSQKDWDEGDLKLTVAST
ATKVIMIEAGANEIPEAKMIEAIYKCHDVNQTVIAFINKIREEVGKPKHAYTSCAIPEEM
FAAMREIVTPEQMEEAVFTDEKQQREENIREITDKFAEAFAENEEWLAVLDEAVYQYQKK
TVRKMILKDHKRPDGRAIDQIRPLAAEVDLIPRVHGSAMFTRGQTQICDVVTLAPLSEVQ
KIDGLDENVTTKRYMHQYNFPSYSVGETKPSRGPGRREIGHGALAERALLPVLPSVEEFP
YAIRAVSETFESNGSTSMASTCASCMSLMAAGVPIKKMVAGISCGLVTGETDDDYLVLTD
IQGLEDFFGDMDFKVTGTHDGITAIQMDIKIHGLTRPIVEEAIARTREARVYIMDEVMSK
AIAEPRKEVNQWAPKIEQITIDPNKIGDVVGQKGKTINEIIARTGVKIDITDDGAVSVCG
TDKEAIAKAIDMIKIITTDFKEGQIFTGTVVSIKEFGAFIEFAPGKEGMVHISKIAKERI
EHVEDVLTLGDVVKVVCLGKDKMGRISFSIKDVPADQK
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaaagttattcaatggaactggcaggcagaacactgaccgttgatatcggaaga
gtatgtgcacaggcaaatggtgccgcattattaaaatatggagagactaccgtattatct
acggctactgcttccgacaagccgagagatggcgttgatttcttcccgctgagcgtggaa
tttgaagaaaaaatgtactcggttggaaaaattcctggcggatttaacaagcgtgaagga
aaagcatcagagaactctattcttaccgcacgtgtcattgaccgtccgatgagacctctg
tttccaaaagattaccgcaatgatgtaaccttaaataatatggttatgtctgtagatccg
gagtgtcgtccggagctggttgccatgatcggtgcagcactttctactaccatttccgat
attccgtttgacggcccatgtgccatgacccagatgggaatgaagaatggtgaatttatt
gtaaacccatcccagaaagactgggacgagggagatttaaagcttacggttgcatctaca
gcaacaaaggtcatcatgattgaggccggtgccaatgagattccggaagcaaagatgatt
gaggctatttataagtgccatgatgtcaaccagacagtcattgcatttatcaataagatc
cgggaagaggttggcaaaccgaagcatgcgtatacaagctgtgcgattccggaagaaatg
tttgcagctatgcgggaaatcgtcactccggagcagatggaagaagcggtatttaccgat
gaaaagcagcagagagaagagaatatccgtgaaatcacagataaatttgcagaggctttt
gcagagaacgaggagtggcttgctgttcttgacgaggccgtttaccagtatcagaagaag
actgttcgtaagatgatcttaaaggatcataagcgtccagacggacgtgcgatcgatcag
atccgtccgctggctgcagaagtagatctgatccctcgtgtacatggttctgccatgttt
acccgtggacagacacagatctgcgatgttgttacacttgcaccgctttcggaagtacag
aagattgacggacttgatgagaacgtgacaaccaagcgttatatgcatcagtacaatttc
ccgtcctattctgttggagagacaaagccaagcagaggtccgggacgtcgtgagatcgga
cacggtgcgcttgcagagcgtgcattacttccggttcttccttctgtggaggagttcccg
tatgcaatccgtgcagtttccgagacatttgaatccaatggatctacttccatggcatct
acctgtgcgtcctgtatgtcactgatggctgcaggtgttccgattaaaaagatggttgca
ggtatttcctgtggtcttgtgaccggagagacggatgatgattatctggtactgacagat
atccagggacttgaagatttcttcggagatatggatttcaaggtaaccggtacacatgat
ggtatcactgcaatccagatggatatcaagatccatggcctgacccgtccaatcgtagaa
gaagccattgcccgtacccgtgaggcacgcgtctacattatggatgaagttatgagcaag
gcaattgcagagccacgaaaagaagtaaatcagtgggcaccgaagattgaacagatcacc
attgatccgaataaaattggagatgttgtgggacagaagggtaagacaatcaatgagatc
attgcccgtacaggtgtcaagattgatattacagatgatggtgcggtttctgtctgtgga
acagacaaggaggcaatcgcaaaggccattgatatgataaaaatcatcacaaccgatttt
aaggaaggacagatctttaccggtacagttgtaagtatcaaagagtttggtgcttttatc
gagtttgcaccaggcaaggaaggaatggttcacatttcaaagattgccaaggaacgcatt
gagcatgtcgaggatgtactgacgcttggagatgttgtgaaagttgtctgtcttggaaag
gacaagatgggaagaatcagtttttccattaaggacgttccggcagaccagaaataa
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