KEGG   Roseburia faecis: ACIRUI_02820
Entry
ACIRUI_02820      CDS       T10789                                 
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
rfc  Roseburia faecis
Pathway
rfc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rfc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ACIRUI_02820
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rfc03019]
    ACIRUI_02820
   03016 Transfer RNA biogenesis [BR:rfc03016]
    ACIRUI_02820
Enzymes [BR:rfc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     ACIRUI_02820
Messenger RNA biogenesis [BR:rfc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     ACIRUI_02820
Transfer RNA biogenesis [BR:rfc03016]
 Prokaryotic type
  tRNA degradation factors
   ACIRUI_02820
SSDB
Motif
Pfam: RNase_PH S1 RNase_PH_C PNPase KH_1 S1_RRP5 KH-I_KHDC4-BBP KH_2 CobA_CobO_BtuR MUG2_C
Other DBs
NCBI-ProteinID: XKQ65883
LinkDB
Position
559763..561859
AA seq 698 aa
MYKSYSMELAGRTLTVDIGRVCAQANGAALLKYGETTVLSTATASDKPRDGVDFFPLSVE
FEEKMYSVGKIPGGFNKREGKASENSILTARVIDRPMRPLFPKDYRNDVTLNNMVMSVDP
ECRPELVAMIGAALSTTISDIPFDGPCAMTQMGMKNGEFIVNPSQKDWDEGDLKLTVAST
ATKVIMIEAGANEIPEAKMIEAIYKCHDVNQTVIAFINKIREEVGKPKHAYTSCAIPEEM
FAAMREIVTPEQMEEAVFTDEKQQREENIREITDKFAEAFAENEEWLAVLDEAVYQYQKK
TVRKMILKDHKRPDGRAIDQIRPLAAEVDLIPRVHGSAMFTRGQTQICDVVTLAPLSEVQ
KIDGLDENVTTKRYMHQYNFPSYSVGETKPSRGPGRREIGHGALAERALLPVLPSVEEFP
YAIRAVSETFESNGSTSMASTCASCMSLMAAGVPIKKMVAGISCGLVTGETDDDYLVLTD
IQGLEDFFGDMDFKVTGTHDGITAIQMDIKIHGLTRPIVEEAIARTREARVYIMDEVMSK
AIAEPRKEVNQWAPKIEQITIDPNKIGDVVGQKGKTINEIIARTGVKIDITDDGAVSVCG
TDKEAIAKAIDMIKIITTDFKEGQIFTGTVVSIKEFGAFIEFAPGKEGMVHISKIAKERI
EHVEDVLTLGDVVKVVCLGKDKMGRISFSIKDVPADQK
NT seq 2097 nt   +upstreamnt  +downstreamnt
atgtacaaaagttattcaatggaactggcaggcagaacactgaccgttgatatcggaaga
gtatgtgcacaggcaaatggtgccgcattattaaaatatggagagactaccgtattatct
acggctactgcttccgacaagccgagagatggcgttgatttcttcccgctgagcgtggaa
tttgaagaaaaaatgtactcggttggaaaaattcctggcggatttaacaagcgtgaagga
aaagcatcagagaactctattcttaccgcacgtgtcattgaccgtccgatgagacctctg
tttccaaaagattaccgcaatgatgtaaccttaaataatatggttatgtctgtagatccg
gagtgtcgtccggagctggttgccatgatcggtgcagcactttctactaccatttccgat
attccgtttgacggcccatgtgccatgacccagatgggaatgaagaatggtgaatttatt
gtaaacccatcccagaaagactgggacgagggagatttaaagcttacggttgcatctaca
gcaacaaaggtcatcatgattgaggccggtgccaatgagattccggaagcaaagatgatt
gaggctatttataagtgccatgatgtcaaccagacagtcattgcatttatcaataagatc
cgggaagaggttggcaaaccgaagcatgcgtatacaagctgtgcgattccggaagaaatg
tttgcagctatgcgggaaatcgtcactccggagcagatggaagaagcggtatttaccgat
gaaaagcagcagagagaagagaatatccgtgaaatcacagataaatttgcagaggctttt
gcagagaacgaggagtggcttgctgttcttgacgaggccgtttaccagtatcagaagaag
actgttcgtaagatgatcttaaaggatcataagcgtccagacggacgtgcgatcgatcag
atccgtccgctggctgcagaagtagatctgatccctcgtgtacatggttctgccatgttt
acccgtggacagacacagatctgcgatgttgttacacttgcaccgctttcggaagtacag
aagattgacggacttgatgagaacgtgacaaccaagcgttatatgcatcagtacaatttc
ccgtcctattctgttggagagacaaagccaagcagaggtccgggacgtcgtgagatcgga
cacggtgcgcttgcagagcgtgcattacttccggttcttccttctgtggaggagttcccg
tatgcaatccgtgcagtttccgagacatttgaatccaatggatctacttccatggcatct
acctgtgcgtcctgtatgtcactgatggctgcaggtgttccgattaaaaagatggttgca
ggtatttcctgtggtcttgtgaccggagagacggatgatgattatctggtactgacagat
atccagggacttgaagatttcttcggagatatggatttcaaggtaaccggtacacatgat
ggtatcactgcaatccagatggatatcaagatccatggcctgacccgtccaatcgtagaa
gaagccattgcccgtacccgtgaggcacgcgtctacattatggatgaagttatgagcaag
gcaattgcagagccacgaaaagaagtaaatcagtgggcaccgaagattgaacagatcacc
attgatccgaataaaattggagatgttgtgggacagaagggtaagacaatcaatgagatc
attgcccgtacaggtgtcaagattgatattacagatgatggtgcggtttctgtctgtgga
acagacaaggaggcaatcgcaaaggccattgatatgataaaaatcatcacaaccgatttt
aaggaaggacagatctttaccggtacagttgtaagtatcaaagagtttggtgcttttatc
gagtttgcaccaggcaaggaaggaatggttcacatttcaaagattgccaaggaacgcatt
gagcatgtcgaggatgtactgacgcttggagatgttgtgaaagttgtctgtcttggaaag
gacaagatgggaagaatcagtttttccattaaggacgttccggcagaccagaaataa

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