Roseburia faecis: ACIRUI_03005
Help
Entry
ACIRUI_03005 CDS
T10789
Name
(GenBank) penicillin-binding transpeptidase domain-containing protein
KO
K05364
penicillin-binding protein A
Organism
rfc Roseburia faecis
Pathway
rfc00550
Peptidoglycan biosynthesis
rfc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rfc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ACIRUI_03005
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rfc01011
]
ACIRUI_03005
Peptidoglycan biosynthesis and degradation proteins [BR:
rfc01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
ACIRUI_03005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer_2
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
XKQ65919
LinkDB
All DBs
Position
597105..598535
Genome browser
AA seq
476 aa
AA seq
DB search
MRRKKKKIKKSNKEFLVIMYLFLAVFLSMMIYFVYFQVCKSESFINSPYNSLQDLFSDHV
IRGDIVSADGKVLATTKVSADGTQTRSYPQGRMFAHAVGYAVNGKAGLENQENFSLLRSH
EFFLKRIADDISDKKAQGDTVVTTLDAQIQQVAYKSLGNYQGAVIVMEPDTGKIIAMVSK
PDYDPNTVKKDWSSLTAEGSTVLYNRATQGKYAPGSVFKILTTLEYYRENPSAYDQYAFD
CSGSISVDGQTIHCAGNKHHGQETLKSSFSNSCNSSFANISLSLNREKFKQTCDSMLFNQ
NLPIAFESGKSSFSLNKNDSNAMAMETGIGQGKTLVSPLHMALIASAVDHDGILMRPYLV
NNIQNDSGVEVSSNKPKTYATLMTETEAGLLQQYMRAVVTDGTGRKLSGQSYEASGKTGT
AQVSDTSDQTNAWFVGYAKKDGYKDIAIAVVVENSGAGSTYAVPVAKNVFDVYFNR
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgagaagaaaaaagaaaaagataaagaaaagtaataaagaatttcttgttattatgtat
ctgttcctggcagtgtttctgtctatgatgatttattttgtctattttcaggtatgtaag
agtgaatcgtttatcaacagtccgtataattccctgcaggatctgttttcggatcatgtg
atccgtggggatattgtatctgcagacggcaaagtacttgccacaacaaaagtatccgca
gacggaacacagaccagaagctatccgcagggacgcatgtttgcccatgcagttggttat
gcggtgaatggaaaagcgggactggaaaaccaggaaaatttttctttgttgcgttcccat
gagtttttccttaagagaatcgcagatgatatttcagataagaaggcacagggggatacg
gttgtcacgacgctggatgcacagattcagcaggtggcatacaaatctcttggaaattat
cagggagctgtgattgttatggaaccggataccggaaaaatcattgcaatggtgtcaaaa
ccggactatgatcccaatacggtaaaaaaggactggagcagtctgacggcggagggaagc
acggtgctttacaatcgcgccacgcagggaaaatatgcgccgggatcggtgtttaagatc
ttaacgaccctggagtattatcgtgagaatccttctgcctatgaccagtatgcgtttgac
tgcagtggttctatttcggttgacgggcagaccattcactgtgcgggaaataagcatcac
ggtcaggaaacattaaagagttccttttctaattcctgcaattcttcgtttgccaatatt
tcactgtcactgaaccgagagaaatttaaacagacctgtgacagcatgctgtttaatcaa
aatcttccgattgcttttgagtccgggaaaagcagtttttctttaaataaaaatgacagc
aatgcaatggcgatggaaacgggaatcggtcagggaaaaacactggtttcgccactgcat
atggcgctgatagcaagtgccgtggatcatgatggaattctgatgcgtccgtatctggtg
aataatatacaaaatgattccggggttgaagtaagcagcaataaaccgaaaacttatgcg
acactgatgacggagacggaagccggtttgttacagcagtatatgcgtgcagttgttaca
gatggaacgggaagaaaattatccggacagtcttatgaagcttccggcaaaacaggaacg
gcgcaggtatcggacacgtcggatcagacaaatgcctggtttgtgggatatgcaaagaag
gatggctataaagatatcgcaatcgcagtcgttgtggagaacagtggtgcgggcagtacg
tacgcggttccagttgcaaagaacgtatttgacgtatattttaacagatga
DBGET
integrated database retrieval system
