Roseburia faecis: ACIRUI_03080
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Entry
ACIRUI_03080 CDS
T10789
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
rfc Roseburia faecis
Brite
KEGG Orthology (KO) [BR:
rfc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rfc03009
]
ACIRUI_03080 (rimO)
Enzymes [BR:
rfc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
ACIRUI_03080 (rimO)
Ribosome biogenesis [BR:
rfc03009
]
Prokaryotic type
ribosomal protein modification factors
ACIRUI_03080 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TMF_TATA_bd
TRAM
Motif
Other DBs
NCBI-ProteinID:
XKQ65934
LinkDB
All DBs
Position
609708..611036
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AA seq
442 aa
AA seq
DB search
MKLLFVSLGCDKNLVDSEYMIGMLTSHGIELTDDETEADIIIVNSCCFIGDAKEESINTI
LEMAEQKKTGCCKSLIVTGCLTQRYQDEVKKEIPEVDAILGTNSYDSIVEALEETLQHKF
YKNFHTLSGLPQLSTKRTVTTGGHYAYLKIAEGCNKNCTYCVIPSVRGRYRSVPMDELVT
SAEELVAGGVKELILVAQETTLYGVDLYGKKCLHELLDRLNGISGLFWIRIMYCYPEEIY
EELINSMIKDKKVCHYLDMPIQHCNDTILQRMGRKTNKKELIERIHYLRKRVPDITLRTS
LICGFPGETKEQHEELMQFVNDMEFDRLGAFTYSAEEGTPAAEMPDQVPQEQKEEWQADV
MELQEEVIFDKNEAMKGTVLYAFIEGQVADENNTYVGRTYRDAPNVDGYIFINTDEELLT
GDIVKVEVTGAYEYDLIATIVK
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaaattattatttgtttcactcggatgtgacaaaaatctggtagattccgagtacatg
atcggtatgcttaccagtcatggaattgaactgacggatgatgaaacggaagcggatatc
attattgtcaacagctgctgttttatcggcgatgcaaaagaagaaagcattaacaccatt
ctggaaatggcagagcagaaaaaaacaggctgctgtaaatcactcattgtcaccggctgc
ctgacacagcgttatcaggatgaagtgaaaaaagaaataccggaagtagatgctatttta
ggaaccaattcctatgattccattgtagaggcactcgaggagaccctgcagcataaattt
tataaaaattttcatacgctcagcggactgccgcagctgtcgaccaaacggacggttacg
acaggcggacattatgcatatctgaaaattgcagagggatgcaacaaaaactgcacctac
tgtgtgatcccgtctgtgcgcggacgttaccgcagtgttccgatggacgagctggttacg
tcagcagaagaactggttgcaggaggcgtaaaggaactgatccttgttgcgcaggagaca
acgctttacggtgtggatctgtatgggaaaaaatgcctgcatgaattgttagaccgcctg
aacgggatttccggtctgttctggattcgtattatgtactgttatccggaggaaatctat
gaggaactgatcaattccatgattaaggataaaaaggtctgtcactatctggacatgccg
atccagcactgcaacgatacaattttgcagcgcatgggaagaaaaacaaataaaaaagaa
ctgatcgagagaatccattatttgagaaaacgtgtcccggatatcactttgcgaacctct
ttgatctgcggattcccgggggagacaaaagagcagcacgaagaactgatgcagtttgtc
aatgatatggaatttgatcgtctcggagcgtttacttattccgcggaggaaggaacaccg
gcagcggaaatgccggatcaggtgccgcaggaacaaaaagaggaatggcaggcagacgtc
atggaacttcaggaagaagtgatttttgacaagaatgaagccatgaaaggtacggttttg
tatgcgtttattgaaggacaggttgcggatgaaaataatacctacgtcggcagaacctac
cgggatgcgccaaatgtagacggatatatttttatcaatacggacgaagaacttttaacc
ggagatattgtaaaggtggaagttaccggtgcgtatgaatatgacctgatcgctacgatc
gtaaaatag
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