Roseburia faecis: ACIRUI_07510
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Entry
ACIRUI_07510 CDS
T10789
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
rfc Roseburia faecis
Brite
KEGG Orthology (KO) [BR:
rfc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rfc03009
]
ACIRUI_07510 (rlmD)
Enzymes [BR:
rfc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
ACIRUI_07510 (rlmD)
Ribosome biogenesis [BR:
rfc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ACIRUI_07510 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
MTS
PrmA
TRM5-TYW2_MTfase
TRAM
Cons_hypoth95
Methyltransf_11
Methyltransf_15
PCMT
Methyltransf_12
N6_Mtase
Motif
Other DBs
NCBI-ProteinID:
XKQ66764
LinkDB
All DBs
Position
complement(1561541..1563025)
Genome browser
AA seq
494 aa
AA seq
DB search
MKKNDLFSLKITDMGVDGEGIGKYDGMTFFVKDALIGDEIRARATKLKKHYGYARVEKII
TPSPYRVEPQCPLHRRCGGCQIQALSYEQQLAFKENKVRSNLQRIGGFSKEELEQVCLPI
VGMEHPFRYRNKAQFPVGLDKEGKLVTGFYAARTHAIIPVEDCLLGVEENKDVLMAVKEW
MLLKQIPAYDETTGTGLVRHILIRYGFTTEEVMVCLIINGDRLPEKETLIERLSVLPGMT
SISYNVNTERTNVILGKHTECIWGMPYITDYIHLRNTGDFSVEDTAIAYHISPQSFYQVN
PVQTEKLYSTALEYAKLTGKESVWDLYCGIGTISLFLSQKAKQVYGVEIVPQAIEDAKTN
AALNGITNAEFFLGKAEEVLPQFYNSDDLDAGMRHPDVIVVDPPRKGCDEQCLSTMLAMR
PERIVYVSCDSATLARDLRILVDGGYELQKVRAFDQFAHTGHVETVVLLSKGIIDSQKVK
VEMSLEDMDMSGFQ
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaacgatttattttctttgaaaattacagatatgggagtcgacggggaaggc
atcggaaagtacgatgggatgacatttttcgtcaaggatgcgctgatcggagatgaaatt
cgtgcccgtgccacaaaactgaaaaaacattatggatatgcccgtgtggagaaaattatc
acaccatctccataccgcgtagaaccgcaatgtccgctccaccgccgctgcggtggctgt
cagatacaggcactttcctatgagcagcagcttgcattcaaggaaaacaaggtgcgcagt
aatctgcagaggattggaggattttccaaagaagagttagagcaggtatgtttgccgatc
gttgggatggagcatcctttccgctaccgcaacaaggcacagtttccggtgggactggat
aaagaaggaaaacttgtgaccggattttatgcggcacgtacgcatgccatcattccggtg
gaagactgtctgcttggggtagaggaaaataaggatgtgcttatggcggtaaaggaatgg
atgctgctaaagcagattccggcttacgatgagactaccggaacaggactggtacgccat
attttgatccgctatggatttaccaccgaagaggtgatggtatgcctgattattaacgga
gaccggctgccggaaaaagaaactctcatcgagcggctttcggtgctgccggggatgact
tccatttcctataatgtaaataccgagcgcaccaatgtcattcttggaaaacacacggaa
tgtatctggggcatgccatacatcacggattatattcatctgcgtaataccggagatttt
tcagtggaagatacggcgattgcctatcatatttctccgcagtcgttttatcaggtcaat
ccggtacagacagagaaactctacagcacagcactggagtatgcaaagctgaccggaaaa
gaatccgtctgggatctgtattgcgggatcggcacgatttcgctctttttatcccagaag
gcaaagcaggtatacggagtggaaattgttcctcaggcgatcgaggatgcaaagactaat
gctgcattaaacggtattacgaatgcagagttttttttgggaaaagcggaggaagtattg
ccgcagttttataacagcgacgatctggatgcgggaatgcgccatccggatgtgattgtg
gtagatccgcctcggaaggggtgcgatgagcagtgtttgtccacgatgcttgccatgcgt
ccggagcggattgtctatgtgagttgtgattctgctacgcttgccagagatctgcgtatt
ttagtagacggtggatatgagctgcaaaaagtgcgggcatttgaccagttcgctcacacc
ggacatgtagaaactgttgttttactttccaagggtataatcgactcgcagaaagtaaag
gttgagatgtctctcgaagatatggatatgtctggatttcaatag
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