Roseburia faecis: ACIRUI_08360
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Entry
ACIRUI_08360 CDS
T10789
Name
(GenBank) PolC-type DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rfc Roseburia faecis
Pathway
rfc03030
DNA replication
rfc03430
Mismatch repair
rfc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rfc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACIRUI_08360
03430 Mismatch repair
ACIRUI_08360
03440 Homologous recombination
ACIRUI_08360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rfc03032
]
ACIRUI_08360
03400 DNA repair and recombination proteins [BR:
rfc03400
]
ACIRUI_08360
Enzymes [BR:
rfc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACIRUI_08360
DNA replication proteins [BR:
rfc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACIRUI_08360
DNA repair and recombination proteins [BR:
rfc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACIRUI_08360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
DUF3072
SH3_ISE2
Motif
Other DBs
NCBI-ProteinID:
XKQ63859
LinkDB
All DBs
Position
complement(1731627..1732319)
Genome browser
AA seq
230 aa
AA seq
DB search
MDYTVLDLEMTGLAPKRDKVIEIGAVRVRNGEIADTYGTLVRPGMSIPETVVQLTGITDE
MAALGKEENVAMQELLQFIGDDILVGHNLIFDYSFLKQWAVNQKIPLELSACDTLRIARA
LLPGAQSKKLESLCEYFQIEREHAHRALDDAVETYKVFENLKSIEGASMELFVPKPLVYK
AKRQTPATEHQKERLRELMEQYGRKDSISWETLTRSEASRLQDKIRAGNF
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggattatacggttcttgatctggagatgacgggactggctccgaaaagggacaaagta
atagaaatcggggcggttcgtgtacggaacggagagattgcagatacatatggaacgctc
gtgcgtccgggaatgtcaattccggaaacggtagtacagctgaccgggattacagatgaa
atggcggctttggggaaagaagagaatgtggcaatgcaggaacttctgcaatttatcggg
gatgatattcttgtgggacataatctgatttttgattacagttttctgaagcagtgggcc
gtcaatcagaaaattccactggaattgtcggcctgtgataccctgcggattgcgcgggca
ctccttccgggggcacagtcgaaaaaactggaaagcctgtgtgaatattttcagattgaa
cgggaacatgcacaccgggcactggatgatgcagtagaaacatataaggtatttgaaaat
ttaaaatccatagaaggtgcttccatggaactgtttgtcccgaaacctctggtgtataag
gcaaagagacagacgccggcaacggagcatcagaaagaacggctcagggaactgatggaa
caatatggaaggaaagacagtatcagctgggagactcttacacgcagtgaagcctcccgg
ctgcaggataagatcagggctggaaacttttaa
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