Roseburia faecis: ACIRUI_09365
Help
Entry
ACIRUI_09365 CDS
T10789
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
rfc Roseburia faecis
Brite
KEGG Orthology (KO) [BR:
rfc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rfc03000
]
ACIRUI_09365
Transcription factors [BR:
rfc03000
]
Prokaryotic type
Helix-turn-helix
LacI family
ACIRUI_09365
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_10
HTH_38
Sigma70_r4
HTH_3
Peripla_BP_6
HTH_24
HTH_11
Fe_dep_repress
HTH_Tnp_ISL3
HTH_23
MarR_2
HTH_7
Phage_terminase
HTH_36
Sigma70_r4_2
RNase_Zc3h12a
HTH_5
Motif
Other DBs
NCBI-ProteinID:
XKQ64051
LinkDB
All DBs
Position
1934801..1935802
Genome browser
AA seq
333 aa
AA seq
DB search
MATIKDIANRLGVSVSTVSKGLNGASDISDELRQMVLDTAVEMGYSTKRSKKVENRKLCI
FIENMNYETIDEFGYDIVLGFKQNAFRRKWDVDILPITPAFQEEEKYDTFLLKNGYCGAF
LMGLALHDSWIKQLENTTMPTVLFDNFISGNPNVCYLGTDSYEGITMAVNHLVNLGHKNI
AFLNGSLYSLVSDQRQEAFESAMAAASLPVQKDLTAYGYYVSDSAKYHVPGFLSAGATAV
VCGNDLIAKGVIDECTKRGFRVPEDVSVVGFDDISIAATFDPPLTTIRQERNELGRCAYD
ILNSLIHHIPISKTLLRPKLIERESTARCAHRD
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggctacaatcaaagatattgccaatcgtcttggagtttctgtaagcacagtctccaaa
ggtttaaacggcgcaagtgacataagtgatgagctgcggcagatggttctcgataccgct
gtggagatgggatacagcaccaagcgttccaagaaagtggaaaaccgcaagctttgcatt
ttcatagaaaacatgaattacgaaacaattgatgaattcggatatgacatagttctcggt
ttcaaacagaatgcgttccgccgcaaatgggatgttgatattctccccatcaccccggca
tttcaggaagaggaaaaatacgatacctttctgttgaaaaacggctattgcggagccttt
ctgatgggtcttgcattgcatgattcctggatcaagcagctggaaaacactaccatgcca
actgtgctttttgacaatttcatctctggaaatccaaatgtctgctatcttggaaccgac
agctacgaaggcatcaccatggcagtaaatcatctggttaatctcgggcataaaaacatt
gcattcttaaacggttccttatactcactggtttctgaccagcggcaggaggcctttgaa
agtgctatggctgctgcctcacttcctgtacagaaggatctgacagcttacggctactat
gtatccgacagtgccaaatatcatgttcccggatttctttccgccggtgccactgccgtg
gtctgcggcaatgacctgattgccaaaggtgtcattgacgaatgtacgaagcgcggattc
cgcgtgccggaagacgtcagtgttgttggttttgacgacatatccattgctgccactttt
gacccgccgcttaccacaatccgtcaggaacgcaacgagcttggccgttgtgcttacgat
attttaaattccctgatccatcacattccgatcagcaaaacgctgctgcgtcctaagctg
atcgagcgtgaatctactgcgcgctgtgcgcaccgcgactga
DBGET
integrated database retrieval system
