Roseburia faecis: ACIRUI_10080
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Entry
ACIRUI_10080 CDS
T10789
Symbol
tnpC
Name
(GenBank) IS66 family transposase
KO
K07484
transposase
Organism
rfc Roseburia faecis
Brite
KEGG Orthology (KO) [BR:
rfc00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
ACIRUI_10080 (tnpC)
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Gene cluster
GFIT
Motif
Pfam:
DDE_Tnp_IS66
zf-IS66
LZ_Tnp_IS66
DDE_Tnp_IS66_C
Fib_alpha
SlyX
FlxA
Motif
Other DBs
NCBI-ProteinID:
XKQ64185
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Position
complement(2088448..2090085)
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AA seq
545 aa
AA seq
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MPSGVRDIQLLELKDTISQLNNTISTQNGLIRSLQKMLQERDAKDSEKDQLIANLQAQLD
YLKTRLFGSTSEIRHEQLPGQLDLFHLQTEDEPEPVPLEVEYIEVKAHKKARKSKAAYDE
VFADLPTENVYVDTLTEEQKTCDVCGTMMVPIGHEPIRTELRYTEPKLERIDYYATTYEC
PQCKETEDPRFIKDEGTPALIPGSYASSGLAAHVMYYKYVMSMPLYRQEKDFEHLGVKIS
RTTMASWIIYCAENYFLPMYEYLHRQLLRRRYLMADETPIQVLKEEGRRPQSKSYVWLVR
TGDDGELPIILYNYTPTRAGSHAATFLAGADPGYYLMVDGYKGYNKVPEAQRCCCWAHIR
RYWLRAIPKGHEKDYTHPAVQGFLYCNKLFEYERSYREKGLSPRQIYHRRLKDQKPVIEA
FLSWLDQLHPESGDRLIKAINYSNGCRPFMMNYLKDGACSLSNNLSENSIRPLVVGRKNW
LFCDTPAGADASMKIYSMIETAKANELDPLKYLSFLLEHRPGAEMSDGELEQFAPCSKLA
QETCK
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgccttcaggagtaagagatatccagctcttagagcttaaggatacgatttcacaactg
aataatacaatcagcactcagaacgggcttatccgttccctgcagaaaatgctgcaggaa
cgtgatgccaaagacagcgaaaaggatcaactgatcgctaaccttcaggcacagttggac
tacctgaagaccagactttttggctccaccagtgagatccggcatgaacagctcccggga
cagttggatctgttccacctgcagacggaggatgaaccggaaccggtgccccttgaggtg
gaatacattgaggtaaaagcacacaagaaggcccgtaaatcgaaagctgcttatgatgag
gtctttgctgatcttccgacagagaatgtttatgtagatactcttacggaagaacagaaa
acgtgtgatgtttgtggaacaatgatggttcctatcggacacgaacccatccggacagaa
ctgcgttatacagagccaaagctggagcgtattgattattatgcgactacctatgagtgt
ccacaatgcaaggaaacggaagacccccggttcatcaaggacgaaggaactcctgcactg
atcccggggagttatgcatcgtccggtcttgcagcacatgtgatgtattataaatatgtc
atgtccatgcccttataccgtcaggagaaggactttgaacatcttggggtaaagatcagc
cgtacgaccatggccagctggatcatctactgcgcagagaattactttctgccaatgtat
gaatatctgcaccggcaactgttgagacgcagatatctgatggcagatgagactccaatc
caggtattaaaagaagaaggccgcagaccacagagtaaatcttatgtctggctggtacgc
actggtgacgatggtgagcttcctatcatcctttataattacactccgaccagagccggc
agtcatgccgctacttttcttgcaggtgcagatcccggatactatctaatggttgatggt
tataaaggatacaacaaagtgccggaggcacagcgttgttgttgctgggctcacatacga
cgctattggctgcgggcaatacccaaaggccacgaaaaggattatacacatccggcagtc
cagggattcctatactgtaataagctgtttgagtatgaacgatcttatcgagaaaaagga
ttatcgcccagacagatttatcatcgccgcctgaaggatcaaaaacctgtcatagaggct
tttttgtcatggcttgaccagctgcatccggaatccggagacaggctgatcaaggcaatc
aactattccaatggttgccgtccgtttatgatgaactatctgaaagatggtgcatgcagc
ctgagtaataatctcagtgagaacagcattcggccattggtagttggccgtaagaactgg
cttttctgtgatacaccagccggggcagatgccagtatgaaaatctattctatgatagaa
acggcaaaagccaatgaacttgatccacttaaatatctgagcttccttctggagcatcgt
cctggtgctgaaatgtcagacggggaattggaacaatttgccccgtgtagtaaattggct
caggaaacttgtaaataa
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