Roseburia faecis: ACIRUI_12560
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Entry
ACIRUI_12560 CDS
T10789
Name
(GenBank) GntR family transcriptional regulator
KO
K03710
GntR family transcriptional regulator
Organism
rfc Roseburia faecis
Brite
KEGG Orthology (KO) [BR:
rfc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rfc03000
]
ACIRUI_12560
Transcription factors [BR:
rfc03000
]
Prokaryotic type
Helix-turn-helix
GntR family
ACIRUI_12560
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTRA
GntR
HTH_41
HTH_11
HTH_DeoR
HVO_A0261_N
Rrf2
HTH_36
HTH_Crp_2
Tnp_IS30_N
Fe_dep_repress
TrmB
DnaD_N
DUF7341
Motif
Other DBs
NCBI-ProteinID:
XKQ64628
LinkDB
All DBs
Position
complement(2562762..2563475)
Genome browser
AA seq
237 aa
AA seq
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MELNNTIAKPLYKQLEDQLKEEIDTGKRKAGSRLPTENELSTTYNVSRVTVRKALAGLSE
LGYLDRKSGKGTFVAEKRIQRNISKGVTGFSEMCRTMGAVPGAKTIKIAIEDPTEKDMEL
MHITPDKKILVLERIRYADEKPVLLEINRFPESFSFLFGENLNDTSLYDVLQNHNIIFDH
SDKTLDIVFASAQEAKILGISKGYPLLRIESTIYNTDCSLVQRCKQLCIGDKFKFTI
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggaattaaacaatacaattgccaaaccactatacaaacaacttgaggatcagttaaaa
gaagagattgacaccggaaaacgtaaagcaggcagccgtcttccaacagaaaatgagtta
agtacaacctacaatgtcagccgggtcactgtccgaaaagctcttgcaggtttatcagaa
ttaggatatctggaccgcaaatccggaaaaggaacttttgttgccgaaaaaagaatccag
cgaaatatctcaaaaggtgttaccggattttctgaaatgtgccgtacaatgggagcagtt
ccaggtgcgaaaaccattaaaattgcaatagaagatcctaccgaaaaagacatggaactc
atgcatattacacccgataaaaagattctcgtattggaacgtattcgttatgccgatgaa
aaaccggtattgttagaaatcaaccggtttcctgaatccttttcttttttatttggagaa
aatttaaatgacacttccctttatgatgtgctgcaaaaccacaatattatttttgatcat
tccgacaaaactttagatattgtgtttgcctccgcacaggaagcaaaaattttggggatt
tcaaaaggttatccacttcttcgaatcgagagtacaatctataatactgattgctcactt
gttcaaagatgtaagcaattatgtatcggcgataaatttaaattcacaatttaa
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