Roseburia faecis: ACIRUI_13840
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Entry
ACIRUI_13840 CDS
T10789
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
rfc Roseburia faecis
Brite
KEGG Orthology (KO) [BR:
rfc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rfc03000
]
ACIRUI_13840
Transcription factors [BR:
rfc03000
]
Prokaryotic type
Helix-turn-helix
LacI family
ACIRUI_13840
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_36
HTH_38
HTH_3
HTH_23
HTH_Tnp_ISL3
HTH_60
HTH_11
MarR_2
HTH_10
Fe_dep_repress
HTH_DeoR
Motif
Other DBs
NCBI-ProteinID:
XKQ64852
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Position
2819101..2820123
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AA seq
340 aa
AA seq
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MVSLKTIAERCGVSTATVSKALNDHKDISEETKNRVKQTAQTLGYFPNAAARALKTNRSY
NIGVLFEEEAGRGLTHEYFSGVLNGLKIQAEKLGYDITFINTCFENRKMSYYEHCRYRNF
EGVVIVCANFDDPDVIELMNSEIPVVTIDYVHHNCTAVTSNNIQGMEDLVKYIYSQGHRK
IAYIHGQEGSSVTRDRLASFYRTIDELGLEIPDTYVRTADYLETKGAAKQTRELLNLEAP
PTCIIYPDDTSLIGGRNVIIEMGLRIPRDISVAGYDGTMISQLLYPKLTTIRQNTEIIGS
EAATRLIGTIEKPRTTLVERVVIEGSLVPGQSVGAIQPKE
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggtatctttaaaaacaattgctgaacgatgtggtgtttctactgcgaccgtaagcaaa
gcactgaatgatcataaagatatcagcgaagagacaaaaaaccgggtaaagcaaacggcg
cagacacttggatattttccgaatgcagcggccagagcacttaagacgaaccgttcatat
aatatcggggtactcttcgaggaggaagccggaagaggcctgacccatgaatatttctcc
ggtgtgctgaacggacttaagattcaggcagaaaagttaggatatgatattacatttatc
aatacctgctttgaaaaccggaagatgtcctattatgaacattgccggtaccggaatttt
gagggagtcgtaattgtatgtgccaattttgacgacccggatgtgatcgagctgatgaac
agtgaaatacctgtagttacgattgattatgtgcatcataactgcaccgcagttacttcc
aacaatatacagggtatggaagatttagtaaagtacatatacagtcagggacacagaaaa
attgcatatattcatggacaggaagggtccagtgttacaagggaccggctggcaagcttt
tatcggacgattgatgagcttggacttgaaattcccgatacatacgtccggacagccgat
tatctggaaaccaaaggagcagcaaaacagacaagggaactgttgaacttagaggctcca
ccgacctgcatcatttatccggatgatacttctttaataggaggaagaaatgtcattatt
gaaatgggacttcgcatcccgagagacatttcggtagccggatatgacggtacgatgatt
tcgcagcttttatatccaaaactcacaacaattcgtcagaatacagaaataattggaagt
gaagcagcaacaaggctcatcggaaccattgaaaaaccgagaacaactctcgttgagaga
gtcgttatagaaggaagtttagttccgggacaatccgtaggtgcaattcagccgaaggaa
taa
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