Roseburia faecis: ACIRUI_14795
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Entry
ACIRUI_14795 CDS
T10789
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rfc Roseburia faecis
Pathway
rfc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rfc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACIRUI_14795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rfc03021
]
ACIRUI_14795
03400 DNA repair and recombination proteins [BR:
rfc03400
]
ACIRUI_14795
Enzymes [BR:
rfc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACIRUI_14795
Transcription machinery [BR:
rfc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACIRUI_14795
DNA repair and recombination proteins [BR:
rfc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACIRUI_14795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
RAD51D_N
DUF4332
PASTA
Motif
Other DBs
NCBI-ProteinID:
XKQ65035
LinkDB
All DBs
Position
2992137..2993096
Genome browser
AA seq
319 aa
AA seq
DB search
MFDFEKPKIEIAEISEDKTYGKFVVEPLERGYGTTLGNSLRRIMLSSLPGAAVSQVKIDG
VLHEFSSIPGVKEDVTEIIMNIKNLAIRNNSSTNEPKVAYIEFEGEGVVTAADIQVDSDI
EIMNPELEIAHLNGGADCKLYMELTITKGRGYVSADKNKTEDTPIGVIAIDSIYTPVDRV
NVTIENTRVGQVTDYDKLTLDVYTNGTLEPDEAVSLAAKVLSEHLNLFIDLSDAAQQAEI
MVEKENDTQEKVLEMNIDELELSVRSYNCLKRAGINTVAELINRTPEDMMKVRNLGRKSL
EEVLAKLKELGLQLNQGEE
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgattttgaaaaaccaaaaattgagatcgctgaaatttcagaagacaagacatat
ggcaaatttgttgtagagcctttggaaagaggatatggtactacacttggcaactcttta
agaagaattatgctttcttctttaccgggagctgctgtaagccaggtgaagattgacgga
gttctccatgaattcagttcaatcccgggcgttaaggaagatgttactgaaattattatg
aacatcaagaacctcgctatccgcaataacagttctacaaatgaaccaaaagttgcttac
attgaattcgaaggggaaggcgttgttacagctgcagatatccaggtcgattcggatatc
gaaatcatgaatcctgaattggagatcgcacatttaaacggtggtgcagactgcaagctc
tatatggaacttaccattacaaagggcagaggatatgtcagcgcagataagaataagaca
gaggatacaccaattggtgtgatcgcaatcgattctatctatacaccggtagatcgtgta
aatgtaacgattgagaatactcgtgtaggtcaggttactgattatgataagcttacattg
gatgtatataccaatggaactttagagccagatgaggcagtcagccttgctgcaaaagta
ttgagtgagcacttaaatctcttcattgatctgtcagatgctgcacagcaggcagagatc
atggttgagaaagagaacgatacacaggagaaggttcttgagatgaatatcgatgaactg
gaattatcggttcgttcttacaactgtctgaagagagctggtatcaataccgttgcagag
cttatcaaccgtactccggaagatatgatgaaggttcgtaaccttggccgcaagtctctt
gaagaagtacttgcaaaactcaaagagttaggtttacagttaaatcagggtgaagaataa
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