Rickettsia felis: RF_0019
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Entry
RF_0019 CDS
T00252
Symbol
pcnB
Name
(GenBank) Poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
rfe
Rickettsia felis
Pathway
rfe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rfe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RF_0019 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rfe03019
]
RF_0019 (pcnB)
Enzymes [BR:
rfe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
RF_0019 (pcnB)
Messenger RNA biogenesis [BR:
rfe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
RF_0019 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
tRNA_NucTran2_2
Motif
Other DBs
NCBI-ProteinID:
AAY60870
UniProt:
Q4UNI7
LinkDB
All DBs
Position
complement(17353..18510)
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AA seq
385 aa
AA seq
DB search
MQVIHKTLKIPSKGYKKILSLLNEKGHARLIGGCVRDALLEKDSYDIDIATNLTPDEVIN
ILSKAKIKTIPTGLKFGTITAILNEEKFEITTLRKDIECNGRHAKVIFTNDFAEDAARRD
FTINALSYCPFKNEIYDYFEGFKDLQQEKVVFIGEALDRIKEDYLRILRFFRFSSYYANQ
LNDGSFKACKALKDGLKTLSRERIKSEMDKIIVSKKAAQILEAMSHIGILELIFSIQNYE
IKFFEQSKELELATNYALLLYNLKNINSKLLLDWKFSRQEAMQILSILNFLNDSKDSMKK
IWFEKKNYKEYLLAACKIGKLNHSQVKEFIYKYDVLLRPKFQVNGNDLLNMNIEKKEIGT
KLEYLKNFWIEQDFKPSKLELLEKL
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgcaagttatacataaaactttaaaaattccttcaaaaggatataaaaaaatcttgagc
cttttaaatgaaaaagggcatgcacgacttattggcggctgcgtacgagatgcgttacta
gagaaagatagctacgatatcgatatagctactaatttaacaccggatgaagtaataaat
attttatcaaaagctaagataaaaaccatcccgaccggcttaaaattcggtacgattacg
gctattttaaacgaggaaaaatttgagattacaactctcaggaaagatatcgaatgtaac
ggcagacatgccaaagtaatattcacaaacgattttgccgaagatgccgcaagacgagat
tttactattaatgctttaagctattgtccctttaaaaacgagatatatgattattttgaa
ggatttaaggatttgcagcaggaaaaggttgtatttataggggaagctctagatagaatt
aaagaagattacttacgaatcctacgcttttttcgattttctagctattatgcgaatcaa
cttaatgatggcagctttaaagcatgtaaagctttaaaagacggcttaaaaactttatca
cgagagcgaataaaaagcgaaatggataaaatcattgtttcaaaaaaagcagcacaaatt
ttagaagctatgtcccacataggaatattagaactaatattctctatccaaaattatgaa
ataaaattttttgagcaatctaaagaattagaattagcaactaattatgctttattacta
tataatttaaaaaatataaattcaaagcttcttctcgattggaaattctcaagacaggaa
gcaatgcaaatattatcgatactaaactttctgaatgattctaaagatagcatgaaaaaa
atttggtttgaaaaaaagaactataaggaatatttattagcagcctgcaaaatcggtaaa
ctaaaccattcacaagtaaaagaatttatctataaatacgatgtattattacgtccgaaa
ttccaagtaaacggtaatgatttattaaatatgaatatagagaaaaaagagataggtaca
aaactggaatatctaaaaaatttttggatagagcaggatttcaagcctagtaaattggag
ttgttggaaaagttatga
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