Rickettsia felis: RF_0022
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Entry
RF_0022 CDS
T00252
Symbol
sca1
Name
(GenBank) Cell surface antigen Sca1
Organism
rfe
Rickettsia felis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
Motif
Other DBs
NCBI-ProteinID:
AAY60873
UniProt:
Q4UNI5
LinkDB
All DBs
Position
20794..25905
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AA seq
1703 aa
AA seq
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MNKLTEQNLLKKSRFLKYSLLASISVGAIIAIPFEGMASSKQKALFQNALEKKLSLRLSQ
SNGNRDTTNTPQQIGTVIVPEPERNTYTSSEIREMEISKQSKASNPLKDIPIEDHYKKVA
RSKSDVGKARKVRPPTRSKTFVDTEKVEQNQNNYTHEPTEQTPQKPEIIITASSPTVSPA
SNGFVTAPNTPNTTLTSPEHYTTAPGTPSTPVTPYQPTPDSKPNDNLEAKTPPNTNSKAV
RRLSFSSEPQQTVVQPSTQAKPPVPPKPLLLSSAGVVAKKVVSNILRVNEMLGIKLAEVE
STIKNTQGKENKKPLQQLKKQIASSQKTTEKLKSEAAKIGIKIKELDEENKSLKTGRVKN
KRELDKDNAKLKENNKKIDKLQQKLTNKNNEANRLSEEIDISVKKVVLIKPQVKAPVTEM
PPAGSFLNQQQQLEVLTQQQKVNAARQAVVDKKRAEANGVKRNSAEYKDLISEREEIQLE
QNQRHIAVEKTKKQQQAEDKEQRQEAQKQLSKIKKQEKAIKAASDEAQKILNDAKKEASR
TKLKKLQEQMDNHVAMVTNDKIEENIKKLEGLALTPSTTSSAATISKQSLTAKSTMQLSH
ELQRTLPEDEDGYLEPIKVQQQPYTVMLSNQEVADPKSMDSGLGSLPSGIETDEDTEFNL
GWGNGHHKELILSVDSKLIEKAAQLISGLDVKRSEILQTTSPSQQKSLNLALQGIENDYQ
EAIEVYQGLQQALIHKSEDIKAYNAEAEKRLDAIKSRADKYFNNIETDADVGFNQDWSNV
HTQTAQSDSVLKMQQALLEKRSKEGSNPNFTTYLDPQPGEEGLKSIDSGLGSLPIDASVI
PQYVEELNNLASFSSLNQIQQKKPLIITNMLLSETSALSDDEFRAVANEVHPKIRPILTY
NRQKEKEAKLVEAEAAHSQVVQNAIKTPNSTQAKEAVENAAKLFGQYNNSFKLTQALRDE
HRKKYYETPKKVTDSINSLDLAVPAESQQLKEPRSKSLEALDLAGSVSSQLKQAEYKSVL
SPSSSVNSLLSNEDEQNHEFEIPKSLSFSFGSLNSDAESQQLKEPRSKSLEALDLAGSVS
SQLKQAEYKSVLSPSSSVNSLFSNEDEQNHEFEILKSLSFSFGSLNSDAESNLSWDNTGD
IGVGHRYGAEDSCPTPDQSSSKIANSSDKNSSETKLALLRTYQMAVIVKRQELEQLPSTS
SGADQNTQKIKELKEVEVTMHDAINACIADSSKLNDVSFEEINEALKKLGSEIPESAISD
FESKAQKDPEAILDGSILQEMLSSKDSLPSGDEEQEDTEVTESGIQKAGDKGLLALPVSS
NECALALSDGREKECLALGDGSEEKEETIEQLSDSVEGNLKIEQEEKKEMQTQISKNAPT
LNQAKVVNTIVNNMIRNRLDASMNMSNNMVAVGAGDEEESRIKRGLWMRGMYGTNNHGRV
ENMTGYRGTNKGATIGFDVEIDNNILGIAYSNVHSVFKFKNSKNNDKELIDSHVVSIYGQ
KELPRNFALQALVSASKNFIKDKTTYSYGDTKIRSNVKHSNHSYNAEALLNYNYLLQNKL
VITPNIGLRYGKSRDGVYNETGINVQEIALTMKENNILSGIVGTKVKVPLKDVLKFNNLG
LTFQGAVEHNFKEKTQRINRVVKIFDTEFKQNYAIPKQPKTSYNLGTGIIGSIKNTTISL
DYNYYLNKHYRSHQGSVKLKVNL
NT seq
5112 nt
NT seq
+upstream
nt +downstream
nt
atgaataagttaacagaacaaaatttactaaaaaaatcaagatttttaaaatattctctt
ctggcctctatttcagtaggagcaataatcgcaataccatttgagggtatggcgagcagc
aaacaaaaagcattatttcaaaacgcactcgaaaagaaattatcgctcagattgtcacaa
tcaaacggaaatagagatacgacaaatacaccgcagcagataggaacagtgattgtaccg
gaaccggaaagaaacacatatacttcatctgaaataagagaaatggaaatatctaagcaa
tctaaagcatctaatccattaaaagatattcctatagaggatcattataaaaaggtagca
cgtagtaagtctgatgtcggaaaagcgagaaaagtacgaccacctactagaagcaaaaca
tttgtagatactgaaaaagtagagcaaaatcaaaataattatactcatgaaccgacagag
caaacgcctcaaaaaccagaaattataataacagcgtcttcgcctactgttagcccagct
tcaaatggctttgtcactgcacctaatacaccaaatactactctgacatcaccggaacat
tatactacggcacctggtactccatcaacaccggtgactccgtatcagcctactccagat
tctaaaccaaatgataatttggaagctaagacaccgccaaacacaaactcaaaagcggta
cgaagattatcgtttagtagcgagccacaacagacagtagtacaacctagcacccaggct
aagcctccagttcctccaaaacctctattgttgagcagtgctggggttgtagcgaagaag
gtggtaagcaatatattacgagttaatgagatgttaggaatcaagttagctgaagtagaa
tcgacaattaaaaatacccaaggtaaagaaaataaaaaaccgttacaacagctaaaaaaa
cagatagcttcatcgcaaaaaacaacagaaaaactaaaatcagaagctgcaaagatagga
ataaaaataaaagaattagatgaagaaaataagagtctaaagaccggaagagtaaaaaac
aagcgtgaattggataaagataatgcaaaattaaaagaaaataataaaaaaatagataaa
cttcaacaaaagttaacaaataaaaacaacgaagcaaataggttatctgaagaaatagat
atttcagtaaaaaaggtagttttaataaaacctcaagtaaaagctccggttacggaaatg
ccgccggctgggtcattcttaaatcagcagcaacaactagaggtgcttactcaacagcag
aaagtcaatgctgctagacaagctgtagtcgataaaaagagagcggaagcaaatggagta
aaaagaaatagtgcagaatacaaagatctaataagtgaaagagaggaaattcaattagaa
caaaatcaacgacatattgctgtagaaaaaacaaaaaaacagcaacaagcggaggataaa
gagcaaagacaagaagcacaaaaacaattatcgaaaataaagaagcaagaaaaagctata
aaagcggcgtcagatgaagctcaaaaaatattgaatgatgcaaaaaaggaagcaagtaga
acaaagctaaaaaaactgcaagagcaaatggacaatcatgttgcaatggtaacaaatgat
aagattgaagaaaatataaaaaaactagagggactagctcttactccgtcaacaacttct
tctgctgctactatttctaagcagtcgctaacagcaaagtcaaccatgcaattaagtcat
gagcttcaaagaactttgccggaggatgaagatgggtacttagagccaataaaagttcag
caacaaccttatacagtaatgttgtcgaatcaagaagtggcagaccctaaaagtatggat
tcaggcttgggaagcttaccaagcggtatagaaacagatgaagataccgaatttaatcta
ggttggggaaatgggcatcataaggagcttattttaagtgtagatagtaaattaatagaa
aaggcggctcaacttataagtggcttagatgtaaaaagaagtgaaatactgcaaacaacc
agtccttcacaacaaaaatcacttaatttagctttacagggaatagaaaatgattaccaa
gaagcaattgaagtctatcaaggattacaacaggcattaatacacaaatcggaagatata
aaagcatataatgcagaagcagaaaaaagattggacgctattaaaagcagagcggataaa
tactttaataatatagaaacagatgcagatgttggatttaatcaagattggagtaatgtg
catacacaaactgcacaaagtgattcagtattaaagatgcaacaggcactactagaaaaa
cgttcaaaagaaggttcaaatcctaactttacaacatatttagacccacagccgggagaa
gaggggcttaaaagcattgattcaggacttgggagcttgccaatcgatgcttcggtaata
cctcaatatgtagaggaattaaataacctagcgtcattttcttcactaaaccaaatacag
caaaaaaagcccctgataataacaaatatgttattatcagaaacatcagcattaagtgat
gatgaatttagagcagtggcaaatgaagttcatcctaaaatacgacctatattaacatat
aataggcagaaagagaaagaagctaaactagtagaagctgaagcggcacatagccaagtt
gttcaaaatgcaataaaaactccaaatagtactcaagcaaaagaggcagtagaaaatgca
gctaagttatttgggcaatataataatagctttaaattaacgcaagcccttcgtgatgag
catagaaagaaatattatgagacgcctaaaaaagtgactgattccattaatagtttggat
ttggcagttcctgcagaatcgcaacagttaaaagaacctagatcaaaaagtctagaagct
cttgatttagctggatctgtatcatcacaattaaagcaagcagaatataagtcggtgtta
tcaccttcatcttctgttaacagcctgcttagcaatgaagatgagcaaaaccatgaattt
gaaataccaaaatcgctttccttttcattcggtagtctaaacagtgatgcagaatcgcaa
cagttaaaagaacctagatcaaaaagtctagaagctcttgatttagctggatctgtatca
tcacaattaaagcaagcagaatataagtcggtgttatcaccttcatcttctgttaacagc
ctgtttagcaatgaagatgagcaaaaccatgaatttgaaatactaaaatcgctttccttt
tcattcggtagtctaaacagtgatgcagaatcaaatttatcatgggataatacaggagat
ataggagtaggtcatagatatggagctgaggatagctgtccaactccggaccaatcaagc
tcaaagatagccaatagtagtgataaaaattcaagtgaaactaaattagctcttctacgg
acatatcaaatggcagtaatagttaaaaggcaagaactggaacaattgccaagtacaagc
tcaggagctgatcaaaacactcagaagattaaagagctgaaagaagtagaagtaactatg
cacgatgctataaatgcatgtatagcagattcatcaaaattaaatgatgtttcttttgaa
gaaataaatgaagcacttaagaaattaggttcagaaattcctgaatcagctattagtgat
tttgaatctaaagcccagaaagatcctgaagctattttagatggatcaatattacaggaa
atgttaagttcaaaagattctttgccatcaggagatgaagaacaagaagacacagaagta
acagaatctggtattcaaaaagcaggagataaagggttacttgcactacctgtatcaagt
aatgagtgtgcattagcattaagtgatggtagagaaaaggaatgtttagcattaggcgat
ggtagcgaagagaaagaagaaacaatagagcaattatccgattccgttgagggtaacctt
aaaattgaacaggaagaaaaaaaagaaatgcaaacgcaaatttcaaaaaatgctcctact
ttaaatcaagcgaaagttgttaatactattgtaaataatatgattcgtaacagattagat
gcatctatgaatatgtctaataatatggtagcggtaggagctggtgatgaagaagaatct
cgtataaaaagaggtttgtggatgcgtggtatgtacggtactaataatcatggacgagta
gaaaatatgaccggttatagaggtactaacaaaggtgctactattgggtttgacgttgaa
atcgacaataatattctaggtatagcttacagtaatgttcattcagtatttaaatttaaa
aatagtaaaaataatgacaaagaacttattgatagtcatgtggtttctatttacggacaa
aaagaattaccgaggaattttgcactacaagctttagtatctgcttctaaaaactttatt
aaagataagacaacttattcatatggtgatactaaaattagaagtaatgtaaaacatagc
aatcatagttataatgcggaagcattactgaattataattatcttttgcagaacaagctt
gttattaccccaaatatcggcttaagatacgggaagtcacgagacggggtatataatgaa
accggtattaacgtacaagaaatagctcttacaatgaaagagaataatatattgtccgga
attgtcggtactaaagtcaaagtacctttaaaagatgttctaaaatttaataatttaggt
ctaacattccaaggagcggtagaacataattttaaagagaaaacccaaagaataaataga
gttgttaaaatatttgatactgaatttaagcaaaattatgcaataccgaaacaaccgaaa
acatcctataatttaggaacgggtattataggtagtatcaagaatactactatttctttg
gattataattattatctaaataaacattatagaagccatcaaggtagtgttaagcttaag
gtaaacctataa
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integrated database retrieval system
