Rickettsia felis: RF_0242
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Entry
RF_0242 CDS
T00252
Symbol
mutM
Name
(GenBank) Formamidopyrimidine-DNA glycosidase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
rfe
Rickettsia felis
Pathway
rfe03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rfe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RF_0242 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rfe03400
]
RF_0242 (mutM)
Enzymes [BR:
rfe01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
RF_0242 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
RF_0242 (mutM)
DNA repair and recombination proteins [BR:
rfe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RF_0242 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_RPB9
Ribosomal_S13
DoxA
IBR_1
Motif
Other DBs
NCBI-ProteinID:
AAY61093
UniProt:
Q4UMW5
LinkDB
All DBs
Position
complement(269457..270287)
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AA seq
276 aa
AA seq
DB search
MPELPEVETLKNSLKDKLIELIIENVELKRDNLRYKLSPLLASEISNTNILDVRRRAKYL
IIDFNNDYSLIVHLGMSGRFTLQPSNYETKKHDHVIFDLSNGEKLIFNDTRRFGMIYNFK
TNFLEKELFNNLGVEPLSDSLTLEYLKSKLITRKIPIKNLIMDNRIIVGVGNIYASESLY
LARIHPDKLGSNLRDDEIESLIKSIREVLAKAITAGGTTLKDFVNGDNKPGYFTQQLTVY
GRERQNCLNCSSTIIKTKHSGRSTFYCRTCQYSEFT
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgccggaacttcctgaagtagaaactcttaaaaactctctgaaagataagctaattgag
cttattatagaaaatgtagagttaaaaagagataatttacgttataaactatctccgctt
ttagcttccgaaatctcaaatactaatatactggatgttaggcgtcgtgcaaaatattta
attatagattttaataatgattattctttaatagttcatctaggtatgagcggtagattt
actctgcaaccttctaactatgaaactaaaaaacacgatcatgtaatttttgatttaagt
aacggtgaaaagttaatttttaacgatactagacgctttggaatgatttataattttaaa
actaacttcctagaaaaagagttatttaataatttaggggtagagccgctttctgattca
ttgacactggaatatttaaaaagcaaattaattactagaaaaataccgataaaaaattta
attatggataatagaattatagtcggagtcggcaatatttacgcttcagaaagtctttat
ttagctagaattcatccggataaattaggtagcaatttaagggatgatgaaatagaaagt
ttaattaaatcgattagagaagtattagctaaagctataactgccggtggcaccaccctt
aaagattttgtaaacggtgataacaaacccggttattttacccagcaacttacggtttac
ggcagagaaagacaaaattgtttaaactgctctagcactattattaagacaaaacattca
ggcagaagtactttttattgtaggacctgtcaatatagtgaatttacttga
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