Rickettsia felis: RF_0253
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Entry
RF_0253 CDS
T00252
Symbol
xseA
Name
(GenBank) Exodeoxyribonuclease VII, large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
rfe
Rickettsia felis
Pathway
rfe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rfe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
RF_0253 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rfe03400
]
RF_0253 (xseA)
Enzymes [BR:
rfe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
RF_0253 (xseA)
DNA repair and recombination proteins [BR:
rfe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
RF_0253 (xseA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Adenyl_cycl_N
Motif
Other DBs
NCBI-ProteinID:
AAY61104
UniProt:
Q4UMV4
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All DBs
Position
complement(280857..282245)
Genome browser
AA seq
462 aa
AA seq
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MHYSQLKKTKNKMLDNFIANQATKEFSVSEISNKIKELLENNFGYIKVKGEISGLKIASS
GHAYFNLKENTAILACTCWRPILAKIKFPLNDGMEVVISGKLSSYAGNSRYQLSVDNLQP
AGLGAMLQILNERKARLEKEGLFNKIRIPIPFLPDKIGVITSITGAVIKDIIHRIRERFP
TRIIIWPVSVQGENSGNEIAEAIEGFNNLEEINKPSVIIVARGGGSIEDLWSFNDEILVR
AAYNSKIPIISAVGHEVDYTLIDLAADKRAPTPTAAAEFAVPVRSILNNTLQSYEKILLN
NTSRLIKYHEQNIINYDKIHRYLSHYMNNKQQLLDETGFNLLDALPCFIELQETKIKSFS
KERVNPAKILNYKTLELTHQTAYLSKSANNTLKNFEYKLELNSTLLASLDYNNVLKRGFA
IVKGETGNFLSSKITAANEKIFNIKFSDGEIKVVRNTVIASD
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgcactactctcagctcaaaaaaaccaagaataaaatgctagacaatttcattgcaaat
caagcaaccaaagagttttcagttagtgagatttctaataaaattaaagaattattagaa
aataattttggctatattaaggtaaaaggagaaatttcaggtttaaaaatagcaagctca
ggtcatgcttattttaacttaaaagaaaataccgctattttagcttgtacttgctggcgt
cctattcttgctaaaatcaaatttcctttaaatgacggtatggaagtggtgattagcggc
aaactttcaagttatgcaggtaattcacgctatcaattatcggtagataatttgcaacct
gcaggacttggtgctatgttgcaaattctaaatgaacgcaaagctcgtttagaaaaagag
ggactatttaataaaatacgtattcctataccttttttacctgataaaataggcgttatc
acttcaataaccggtgctgttattaaagatattattcatcgcattcgcgaacgttttccg
actcggataataatatggccggttagcgtacaaggcgaaaattccggcaatgaaattgct
gaagcaattgaaggatttaacaatttagaagagataaataaaccaagtgttataattgtt
gctagaggcggcggttctatagaagatctttggtcatttaatgatgagatattagtacgt
gccgcttataactcaaaaattcctattatttccgcagtaggtcatgaagtagattatact
ttaatagatttagcagccgataaaagagctccaacaccgactgctgccgcagaatttgct
gtaccggtacgatctattttaaataatactctacaatcttatgaaaaaatattattgaat
aatactagcaggttaattaaatatcacgaacaaaatataataaattacgataaaatacac
agatatctctctcactatatgaataataagcagcaattactggacgaaaccggttttaat
ttgctagatgctttaccgtgctttattgaactacaagaaacaaagattaaatctttttct
aaagaaagagttaaccctgctaaaatactcaattacaaaacattagaattaacacatcaa
acagcttatctatcaaaatcggcaaataatactttgaaaaattttgagtataaattagaa
ttaaatagtacgttacttgcaagccttgattataataacgtattaaaacgaggttttgct
atagttaaaggagaaacgggtaattttttatcttctaaaattactgctgcaaatgaaaaa
atttttaatattaaattttctgacggcgaaattaaagtagttcgtaataccgtcattgcg
agcgactaa
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