Rickettsia felis: RF_0687
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Entry
RF_0687 CDS
T00252
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rfe
Rickettsia felis
Pathway
rfe03420
Nucleotide excision repair
rfe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rfe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RF_0687 (uvrD)
03430 Mismatch repair
RF_0687 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rfe03400
]
RF_0687 (uvrD)
Enzymes [BR:
rfe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RF_0687 (uvrD)
DNA repair and recombination proteins [BR:
rfe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RF_0687 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
RF_0687 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_11
AAA_12
DEAD
UPF0128
DUF87
ResIII
Motif
Other DBs
NCBI-ProteinID:
AAY61538
UniProt:
Q4ULN5
LinkDB
All DBs
Position
733515..735479
Genome browser
AA seq
654 aa
AA seq
DB search
MLNNQDFIHTLNPQQQKAVLHTKGPLLLLAGAGTGKTKVLTSRIANIVHQNLASPQNILA
VTFTNKAAKEMAERVNSLINCYGLNIGTFHSMAARILRDQIEHLNLGLNNRFTIISHDDQ
LKLVKDIVKLKDIDTKKYAPKLIHIIISRWKDQGLLPSKLSASDTNLPLQRVAKLVYEEY
QKNLLISNVLDFGDLLLYNNELFIKNPEILRYYQEKYRYILIDEYQDTNVVQYLWARMLA
SLYKNICCVGDDDQSIYGWRGAEVGNILRFEKDFAGATIIKLEQNYRSTLPILAAASNVI
NNNKNRHGKTLWTDRESGEKIKIISCWSDKEEARYIAGEIDKLVREDRYNAGNIAILVRA
GFQTRSFEEAFINSAMPYKIIGGLRFYERMEIRDVLAYIRISLNQNDNLALERIINVPKR
AIGAASLNKIRVYALERNISNFAAIKEMLEMGEIKAKPYETLKDLVTKIDNWHERFSIDA
PINVVKAILDDSGYLEMLQEEKTEEAFGRIENINEMLRAIAEFNDIHDFIEHSSLVMENE
VLETNYGGSVTIMTLHAAKGLEFDVVFLPGWEEGVFPSQRSLDEEGEKGLEEERRIAYVG
ITRAKKDLYITHAESRKIFYEIVRSYPSRFITEIPDEITIRTSSMKKYNSFYKF
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgttaaataatcaagatttcatacatacattaaatccacaacagcaaaaagcagttctt
catactaaaggaccgcttttattgcttgcaggtgcagggacaggtaaaacaaaagtactt
acctcacgaatagctaatattgttcaccaaaatttagcgtcacctcaaaatattctagcc
gttacttttactaataaagctgctaaagaaatggctgaaagagttaacagtctaattaat
tgctacggtcttaatataggcactttccactcaatggcagctaggatattacgtgaccaa
attgagcatttaaatcttggtttaaataatagatttactattattagtcatgatgatcaa
ttaaaactagttaaagatatagtaaaactaaaagatatcgatactaaaaaatatgctcct
aaattaatacatatcataatttcgagatggaaagatcaaggattattaccaagtaaacta
tcagcatcagatactaatttaccgttgcagagggtggcaaaacttgtatacgaagaatat
cagaaaaatttacttatttctaatgttttagattttggagatttgctactttataataat
gagctttttattaaaaatcccgaaatactaagatattatcaggaaaaatatcgatatatt
ttaatcgatgaatatcaagacactaacgttgtccagtatttatgggcaagaatgctcgca
agtttatataaaaatatttgctgtgtaggggatgatgatcaatctatctatggttggcga
ggagcggaagtcggtaatatattacgctttgaaaaagattttgcaggtgcaacgattatt
aaattagagcagaattatagatcaactttgcctatacttgctgctgcttccaatgttatt
aataataataaaaaccgtcacggtaaaacgttatggacggatagggaaagcggtgaaaag
ataaaaattatctcttgttggagtgataaagaagaagcaagatatatagccggcgaaata
gataaattagtgagagaagaccgatataatgccggcaatattgcaatattagtacgagcc
ggatttcaaacaagaagttttgaggaagcgtttataaatagtgctatgccttataaaatt
ataggaggtttgcggttctatgaacgtatggaaataagagacgtgcttgcttatatccgt
atatctttaaatcaaaatgacaatctagcacttgagcgtattataaatgtgccgaaaagg
gcaataggtgcagctagcttaaataaaattagagtctatgcacttgagcgaaatatttct
aattttgcagccattaaagaaatgttggaaatgggcgagattaaagcaaaaccatatgaa
actctaaaagatttggttactaaaattgataattggcacgaaagatttagtatagatgct
ccaataaacgtagttaaagcaatacttgatgattccggttatcttgaaatgcttcaagaa
gaaaaaaccgaagaagcattcggtagaatcgaaaatattaacgaaatgcttagagctatt
gccgaatttaacgatattcatgattttatcgaacattcaagcttagttatggaaaacgaa
gtgcttgaaactaattacggtggttctgttactataatgaccctgcacgcagctaaaggg
cttgagtttgacgtggtgtttttaccgggctgggaagagggggtatttccgtctcaaagg
tctctagacgaagaaggcgaaaaaggcttagaagaagaacgccgcattgcttatgtcggc
attacgagagccaaaaaagacctctacattacccacgccgaaagcagaaaaatattttat
gaaatagtccgctcttacccttcaaggtttataaccgaaatccctgatgaaattacgata
aggacctcttctatgaaaaaatacaattctttttataagttttaa
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