Rickettsia felis: RF_1324
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Entry
RF_1324 CDS
T00252
Symbol
uvrA
Name
(GenBank) Excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
rfe
Rickettsia felis
Pathway
rfe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rfe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RF_1324 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rfe03400
]
RF_1324 (uvrA)
DNA repair and recombination proteins [BR:
rfe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RF_1324 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RF_1324 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
nSTAND1
AAA_16
AAA_25
nSTAND3
RsgA_GTPase
ATPase
DnaJ_CXXCXGXG
NACHT
CA109-like
AAA_15
Motif
Other DBs
NCBI-ProteinID:
AAY62175
UniProt:
Q4UJW4
LinkDB
All DBs
Position
complement(1408459..1411326)
Genome browser
AA seq
955 aa
AA seq
DB search
MIMNQEYIKVRGAKEHNLKNINVDIPRNKFVVITGLSGSGKSSLAFDTIYAEGQRRYVES
LSSYARQFLHLQNKPNVESISGLSPAIAIDQKTTSKNPRSTVGTITEIYDYLRLLYARVG
IPYSPATGLPIHSQTVSEMVDIINELPKGTKVYLLAPIVRGHKGEFKREIMNLKKQGFQK
LIVNGEVCEIDDLPKLDKNKKHNIEVIVDRIVLDESLGNRLADSLESSLNLAEGITYLEI
VELPPAVKTEFEKNQRITFSEKYSCPVSGFQLTEIEPRIFSFNSPFGACPKCEGIGKEFF
FDRELIVPDQRISIKDGAIVPWGSTSSKFILETLKALADHYKFSIEVPFASLSQNVKDIL
FEGSGEEAIKFEFHDGSKTQIIKQPFAGIIPSLQEKDRTIESVLIKEELAKFKSEHKCTA
CSGFRLKDEALCVKIANFHIGEVAGMSIAALQKWFSHLEEKLNKKQLFIAERILKEITER
LKFLMNVGLDYLTLSREAGTLSGGESQRIRLASQIGSGLSGVLYVLDEPSIGLHQRDNTR
LIETLKRLRDLGNTVLVVEHDEETMYEADHIIDIGPGAGIHGGRVIAEGNAEEIKNFEES
ITGRYLSGRQTIKVPSETRVGHDNRSIELLGAVSNNLDNVDIKIPLGTFTAITGVSGSGK
SSLMIHTLYKAALKHLETTSKVFPGKYRELKGLEYIDKIIDINQSPIGRTPRSNPATYTG
AFTHIRDWFVELPESKARGYKVGRFSFNVKGGRCEACQGDGLIKIEMHFLPDVYVKCDIC
NGHRYNRETLEIKYKGKSIADILMMTVEDAMQFFEKIPLIYEKLITLNEVGLGYIKIGQS
ATTLSGGEAQRVKLAKELSRRSTGKTLYILDEPTTGLHIDDINKLLKVLHKLVDMGNTVL
VIEHNLDVIKTADYIIDVGPEGGDKGGKIVVCGTPADIAACAESHTGRYLKQYLE
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
gtgattatgaatcaagaatatattaaggtacgcggtgctaaagagcataatctaaaaaat
ataaatgttgatattccaaggaataaatttgttgttatcaccggccttagtggttcaggc
aagtcttctttagcttttgatactatttatgcagaaggtcaaaggcgatatgttgaaagc
ttatcttcgtatgcaaggcaattcttgcatttacaaaataaaccgaatgtggaatctatt
tccggattatcgcctgctatcgcaattgaccaaaaaactacttctaaaaatcctcgttct
acagttggaactataacggaaatttacgattaccttaggttattatatgcaagggttggt
attccttactctccggcaaccggtcttccgatacatagccaaacggtttctgagatggta
gatataattaatgaactacctaaaggcacgaaagtatatttacttgctcctattgttaga
ggacataagggggagttcaaacgtgaaattatgaatctgaaaaagcaaggctttcagaaa
ttaatagttaacggtgaagtttgtgaaattgatgatttaccgaaacttgataaaaataag
aagcataatatagaagtcatcgttgatagaatagttctagacgaaagtttaggtaatagg
cttgcagatagcttagagagttcgttaaatcttgccgagggaattacttatttagaaatt
gtagaattgccgccggcagttaagaccgaatttgaaaaaaatcaacgtattactttttcc
gaaaaatattcttgtccggtatccggttttcagcttactgaaatagagcctcgaatcttt
tcttttaatagcccttttggagcatgtcctaaatgtgagggaataggtaaggagtttttc
tttgatagagaattaattgttccagatcaaagaatttctattaaagacggtgcaatagtg
ccttggggtagtacatcttctaaatttatcttagagacattaaaggctcttgccgatcat
tataaattttctattgaagtaccttttgcaagtttatcacaaaatgttaaggatatttta
tttgaaggttcaggagaagaggcaataaaatttgaatttcacgacggttctaaaacgcaa
ataataaaacaaccttttgccggtataataccaagtttgcaggaaaaggaccgtactata
gaatcggttttaattaaagaagaactagctaaatttaagtcagaacataaatgtactgcc
tgctcagggtttagattaaaagacgaagcattatgcgttaaaatagcgaattttcatata
ggcgaagtagcaggtatgagtattgcagccttgcaaaaatggtttagtcacttagaagaa
aaattaaataaaaagcaattatttattgctgagcgtatactcaaagaaattactgagaga
ttaaaatttcttatgaatgtcgggcttgattatctaacgttatcacgagaagcaggtact
ttatcgggaggggaaagtcaacgtattcgtcttgcatctcaaataggttcaggacttagc
ggtgttttatatgtacttgatgagccgtctatcggtcttcatcaacgagataatacaaga
ttaatcgaaaccctaaaaaggcttagagatctaggtaataccgttttggtagtcgagcat
gacgaagaaacaatgtatgaagcagaccatattatcgatatagggccgggagccggtatt
cacggcggtcgtgttattgcagaaggcaatgcagaagaaataaagaattttgaagaaagt
attacaggtaggtatctaagtggtcgtcaaacaatcaaagtaccgtctgaaacaagagta
gggcatgataataggtcaattgaattacttggggcggtttctaacaatttagataatgtt
gatatcaaaattccgcttggtacgtttaccgctataacgggagtatcgggaagtggtaaa
tcaagcttgatgattcatactctatataaagcggctctaaagcatttagagacgactagc
aaagtatttccgggaaaatatagagaattaaaaggacttgaatatattgataaaattatc
gatattaatcaatccccgataggtagaactcctcgttcaaaccctgcgacttatacaggt
gcctttacccatattagagattggtttgtggaattacctgaatcaaaagcaagaggttat
aaagtaggcagattttcgtttaacgttaaaggcggtagatgtgaagcatgccaaggtgac
gggctaattaaaatagagatgcattttctccctgacgtatatgtaaaatgtgatatttgt
aatggtcacagatataatagagaaacacttgaaataaaatataaaggcaaatctattgcc
gatattttgatgatgacggtagaagatgcaatgcaattttttgagaaaatcccgttaatc
tatgaaaaactaattactttaaatgaagtaggtctaggctatattaaaatcggtcagtct
gctactactctttcaggcggtgaagcacaacgtgttaaacttgctaaagaattatcaaga
cgttcaaccggtaaaacgctttatatacttgatgaaccgactacggggctacatattgac
gatattaataaattgctgaaagttttgcataaactcgttgatatgggtaataccgtttta
gttatcgagcataatttagatgttataaaaacggcagattatattattgatgtcggtcct
gagggcggtgacaaaggcggtaagatagttgtatgcggtactcctgccgatatcgctgct
tgtgcggaaagccataccggcagatatttaaagcaatatttggaatag
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