Rickettsia felis: RF_pd53
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Entry
RF_pd53 CDS
T00252
Name
(GenBank) DNA polymerase III, epsilon subunit-like protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rfe
Rickettsia felis
Pathway
rfe03030
DNA replication
rfe03430
Mismatch repair
rfe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rfe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RF_pd53
03430 Mismatch repair
RF_pd53
03440 Homologous recombination
RF_pd53
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rfe03032
]
RF_pd53
03400 DNA repair and recombination proteins [BR:
rfe03400
]
RF_pd53
Enzymes [BR:
rfe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RF_pd53
DNA replication proteins [BR:
rfe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RF_pd53
DNA repair and recombination proteins [BR:
rfe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RF_pd53
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AAY62348
UniProt:
Q4UJA9
LinkDB
All DBs
Position
pRFdelta:complement(26075..26617)
Genome browser
AA seq
180 aa
AA seq
DB search
MIRLKFLEEVDIIIAHNAAFDRPFFDKMFPEVITKVWGCSRVDIDWKAEKIESHKLEYLT
YKYNFFYEGHRAVIDCRAGLHLLAQTLPITKTLVLKQLLNNCHKTRFNVWVHNAPYDSKD
LLKSRGYRWSINPQANYKAWMIEVFEDTLETELTFLNSNVYKTPYNIPVQTINPCDRFMG
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
ttgataagactcaagtttcttgaagaagttgatattatcattgcccacaatgctgcattt
gatagacctttttttgataaaatgtttcctgaagttataaccaaagtatggggatgctca
agagttgatattgattggaaagctgagaaaatagaaagccataaactagaatatcttact
tataaatataatttcttttatgagggacacagagctgttatagactgccgcgctgggttg
catttacttgctcaaaccttacctattactaaaacactagtattaaaacaattacttaat
aattgccataaaaccagatttaatgtttgggtacacaatgccccttatgactctaaagat
ttacttaaatctagaggctatcgctggtctatcaatccacaagcaaattataaagcttgg
atgattgaagtatttgaagatactctcgaaacagagctaacattcctgaattctaatgtt
tacaaaacgccctataatatcccagtacaaaccataaacccttgtgatagatttatggga
taa
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