Rhynchophorus ferrugineus (red palm weevil): 143190157
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Entry
143190157 CDS
T11283
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
rfg Rhynchophorus ferrugineus (red palm weevil)
Pathway
rfg03030
DNA replication
rfg03410
Base excision repair
rfg03420
Nucleotide excision repair
rfg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rfg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
143190157
03410 Base excision repair
143190157
03420 Nucleotide excision repair
143190157
03430 Mismatch repair
143190157
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rfg03032
]
143190157
03036 Chromosome and associated proteins [BR:
rfg03036
]
143190157
03400 DNA repair and recombination proteins [BR:
rfg03400
]
143190157
DNA replication proteins [BR:
rfg03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
143190157
DNA Replication Termination Factors
ELG1-RFC complex
143190157
Chromosome and associated proteins [BR:
rfg03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
143190157
DNA repair and recombination proteins [BR:
rfg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
143190157
Check point factors
HRAD17(Rad24)-RFC complex
143190157
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
Gp44_lid
AAA_22
AAA_assoc_2
AAA_11
Mg_chelatase
AAA_14
AAA_30
AAA_24
AAA_16
ResIII
Rep_fac_C
DEAD
SLFN-g3_helicase
AAA_19
DUF815
Cnd1
bpMoxR
AAA_5
RuvB_N
AAA_2
AAA_7
ATPase_2
Microtub_bd
Kinesin
AAA_28
Motif
Other DBs
NCBI-GeneID:
143190157
NCBI-ProteinID:
XP_076250412
LinkDB
All DBs
Position
Unknown
AA seq
378 aa
AA seq
DB search
MYSFLKSGTLNDPANVSKPSGSGIQKKKAKKLQWVEKYRPKTVENVVEQKEAVAVLQECI
TGSDLPNLLFYGPPGTGKTSTILAAAQQLFGDLYKERILELNASDERGIQVIRDKIKQFS
QLTVNSNRSDGKKCPPLKIIILDEADAMTTAAQTALRRIMEKEAKTTRFCLLCNYVSKII
EPLTSRCSKFRFKPLNEPFILERLNLICKEEGVLITDEVLKALVKESDGDMRKAITALQS
CSNLKGKETYITLQNVYEVLSVIPHKWIIDFLNVCKKKCHISILTNFIKSLEREAYPTHK
IFEQLSDNLIEADIDNVLKAEIGDYLASVSYRSSCSRADFIHLLDLAVNMQRILTVPIEQ
RRLEDKEISNLLTVSGTA
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgtattcttttttaaaatcaggtacattaaatgatcctgcaaatgtatcaaaaccttca
ggatcaggcatccagaagaagaaagctaaaaagttacagtgggttgaaaaatatcgacca
aaaactgttgaaaatgttgttgaacaaaaagaagcagtggcagttcttcaagaatgtatt
actggatctgatttaccaaatctactgttttatggtcctcctgggacaggtaaaacgagt
actattttagctgcagctcagcagttatttggtgatttatataaagaaagaatattggaa
ctgaatgcttcagatgaacgaggaattcaggttattagagacaaaattaaacaattttca
caacttactgtaaatagcaataggtcagatggtaaaaagtgtccacctttaaagataatt
atactagatgaagcagacgctatgacaactgcagctcaaactgctttaagaagaattatg
gagaaggaagcaaaaacaacaagattctgccttctgtgtaattatgtttctaaaattata
gaaccattaacttcaagatgctcaaagtttcgcttcaagcctttaaatgaaccatttatt
ttagaaagactcaatttaatttgtaaggaggagggtgtactaataactgacgaggtttta
aaggctttagttaaagaaagtgatggtgatatgagaaaggctattacagctctccagagc
tgttcaaatctaaaaggaaaagaaacctatattactttgcaaaatgtttatgaagtttta
tcagtgataccacataagtggataatagactttttaaatgtttgcaaaaaaaaatgtcat
atatccattctaacaaattttatcaagagcttagaaagagaagcatatccaacccataaa
atatttgagcaattaagtgataatcttattgaagcagatattgataatgtcttgaaagct
gaaattggagattatcttgcgtctgtaagctacagaagttcttgtagccgagctgatttt
atacatttactagatttggctgtaaatatgcaaagaattttaacagttccaatagagcaa
agacgtcttgaagataaagaaatctcaaacttattaacagtttcaggaactgcttaa
DBGET
integrated database retrieval system
