Rhynchophorus ferrugineus (red palm weevil): 143190200
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Entry
143190200 CDS
T11283
Symbol
U4-U6-60K
Name
(RefSeq) U4-U6 small nuclear riboprotein factor 60K isoform X1
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
rfg Rhynchophorus ferrugineus (red palm weevil)
Pathway
rfg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rfg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
143190200 (U4-U6-60K)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rfg03041
]
143190200 (U4-U6-60K)
Spliceosome [BR:
rfg03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
143190200 (U4-U6-60K)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Gbeta
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
PRP4
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_EML
Beta-prop_Aladin
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_WDR41
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
WD_LRWD1
Beta-prop_WDR19_1st
eIF2A
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_HPS5
WD40_like
Beta-prop_WDR75_2nd
Beta-prop_SPT8
Nbas_N
Motif
Other DBs
NCBI-GeneID:
143190200
NCBI-ProteinID:
XP_076250475
LinkDB
All DBs
Position
Unknown
AA seq
507 aa
AA seq
DB search
MSDDEVLYVKKQKTIHYGSLEDSERARLEAGQDNDDSNDSASEPGAPPPPPDESNEYMGL
EEAMSRDKQALLEEFERRKKARSINVSTDDGEVKRNLRQLGEPICLFGEGPAERRSRLRD
ILSRLGEDSVIRREAEEERKQFEKDQEQTWYHEGPDSLRIARMWIAEYSLPRAKQRLEDA
RRFIELPATTKTARSQELQKKLQQMSIHSSQIGDTRPISYCSFSPNSKLLATASWSGLCK
IWSVPECELKQTLRGHTCNVGAIVFHPKATISQEETICNMASCAADGSVKLWDFKGDEPI
ADIEGHMPHRVSRINFHPSGRFLGTCCFDNSWRLWDLQQCTEVLHQEGHVKPVYCISFQT
DGSVCATGGLDSFGRVWDLRTGRCIMFMEGHLKSIYGIDFSPDGYHIATASEDNNCKIWD
LRKRAHIYTIPAHNNLISDVKFQKIEGNFLATASYDNRVKLWTNKTWQPLKTLSGHDGKI
MSCDISADNNYIATTSYDRTFKIWSPE
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgatgaagtgttatatgttaaaaaacaaaaaacaattcattatgggtcatta
gaagattctgaaagagcccgattagaagcaggtcaagataatgatgatagtaatgatagt
gcttcggagccgggggctcctccacctcctccagatgaatctaatgaatatatgggcctt
gaagaagctatgtcccgagataaacaagctttattagaagaatttgagagacgtaaaaaa
gctcgatccataaatgtttcaactgatgatggtgaagttaaaagaaatcttaggcaacta
ggtgaaccaatatgtctttttggagaggggccggctgaacgtaggagcagattaagagac
attttaagtcgattaggagaggactcagtaattcgaagggaagctgaagaagaacggaag
caatttgagaaagatcaagaacaaacctggtaccatgaaggtcctgattcgcttagaatt
gccagaatgtggattgctgaatattccctgccaagagctaaacaacgattagaagatgct
aggcgatttattgaacttcccgctactactaaaacagcaagatcacaagaactacaaaaa
aaacttcagcagatgtcaattcattcttctcaaataggtgatacaagaccaatatcttac
tgttcatttagtccaaattctaagctattggctacagcatcttggagtggactctgtaag
atctggtctgtacctgagtgtgaattaaaacaaactcttagaggccatacatgcaatgta
ggagctatagtgtttcatccaaaagcaactatttcacaggaagaaactatttgtaatatg
gcttcttgtgctgcagatggatcagtgaaattatgggattttaaaggagatgaacctatt
gccgatatagaaggtcacatgccgcaccgagtgtcaagaattaattttcatccatctggc
cggttcctgggtacctgctgctttgataattcctggaggctatgggatttgcaacaatgt
actgaagttttacatcaagaaggtcatgtgaaacctgtttactgtatatcatttcaaact
gatgggtcagtttgtgcaactggaggtttggattcttttggcagagtctgggatttaaga
actggcagatgtattatgttcatggaggggcatcttaaatcaatttatggtatagacttt
tcccctgatggctatcacatagcaacagctagtgaagataataattgtaaaatatgggat
ttgcggaaaagagctcatatatacacaataccagctcataataatctcatatcagatgtt
aaatttcaaaagattgaaggaaattttttagcaactgcatcatatgataatagagtaaaa
ttatggacaaataaaacatggcaaccccttaaaacattatcaggacatgatgggaaaatt
atgtcttgtgatatttctgctgataacaattatattgccactacttcatatgatagaaca
tttaaaatatggtcaccagaatga
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