Rhynchophorus ferrugineus (red palm weevil): 143191673
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Entry
143191673 CDS
T11283
Symbol
twin
Name
(RefSeq) CCR4-NOT transcription complex subunit 6-like twin isoform X1
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
rfg Rhynchophorus ferrugineus (red palm weevil)
Pathway
rfg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rfg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
143191673 (twin)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rfg03019
]
143191673 (twin)
Enzymes [BR:
rfg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
143191673 (twin)
Messenger RNA biogenesis [BR:
rfg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
143191673 (twin)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
143191673 (twin)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_1
LRR_14
LRR_4
LRR_Zer-1
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
143191673
NCBI-ProteinID:
XP_076253132
LinkDB
All DBs
Position
Unknown
AA seq
575 aa
AA seq
DB search
MPRNSKDKYEQSSFNADVTRKTQAYQLSEEQANHKKTWTELEITRNIRNLSSNLFHMTHL
TALILKNNSLLRIPPDIHRLVNLRNLDLSFNKLRSLPSELGDLIQLRELNLNHNHLRILP
YELGKLFNLMILGLVGNPLTKDILTIYSEPNGTQKLLTFMLDNLQVNTPQPPARPWIPLA
RPSVTRASCIFTVMCYNVLCDKYATRQMYSYCPSWALNWDYRKKGIMEEIQHYGADIINL
QEVEMEQFYNFFMPELKNQGYNGIYSPKSRAKHMAEAERKHVDGCAIFYRMSKFTLIKEH
LVEFNQLAMANADGLEHMLNRVMPKDNIGLAALLQTTENAWDNSPQDAALMKQPVLVCTA
HIHWDPEFCDVKLIQTMMLSNELKSILEESAQTLRTNNVNISDPSNIQLVLCGDFNSLPD
SGVIEFLSTGRVSQDHKDFKTFSYKPCLEKILSCDKPNDFTHSFKLASAYNDEIMAFTNY
TFEFKGIIDYIFYTKNTMTPLGLLGPISQEWLTQNKVIGCPHPHVYSDHFPLLVELEMVP
TIPSPMNGIIRIVQVTNNQTNRKSRKGYIKAPYKK
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgaaattcaaaagataaatatgaacaatcatcattcaatgctgatgttactcga
aaaactcaggcctatcagctgtctgaggaacaagcgaatcacaaaaaaacttggactgag
ttggagataacaaggaatattcgaaaccttagttctaatttatttcacatgacacatttg
acagcattaattttaaaaaataacagtttacttcggataccacctgatatacatcgattg
gtcaatcttcgtaatttggatctgagttttaataagttacgatcactaccatctgaactt
ggggacttaatccagttgagagagttaaacctcaatcacaatcacctaagaattctgcct
tatgaacttggaaaactgtttaatctgatgatcttaggattggtagggaatcccttaaca
aaggatatcctgacaatctacagtgagcctaatgggacccagaagctgctcacctttatg
ttggataatttacaagttaatacgccgcaaccaccagcgaggccatggatacctttagcg
agaccctccgtgactcgggcatcctgtatctttactgtgatgtgttacaatgtgttgtgt
gataaatacgcaacccgacaaatgtacagttattgtccatcttgggctctcaactgggat
tataggaagaaagggatcatggaggaaattcaacattacggagcggacatcatcaatttg
caggaggttgaaatggaacaattctacaacttcttcatgccagaattgaagaaccaagga
tacaacggcatctattcgccgaaatccagagcgaagcacatggccgaggccgaaaggaaa
cacgtagacggctgtgcgatattctacagaatgtccaaatttacgttaatcaaggaacac
ctcgtagagtttaaccaactagccatggctaacgccgatgggctggaacatatgttaaat
agagtgatgccaaaagataatatcggtttagcagccttactccaaaccacagagaacgct
tgggataactcaccacaagatgccgccttgatgaagcaacctgttctggtatgcacagcc
cacatccattgggacccggaattttgtgacgtaaaacttattcaaacgatgatgctaagt
aatgaactgaaatctattttggaagaatctgctcaaactctccggaccaataacgtcaat
atttcagatcccagcaatattcaattggtactgtgtggagactttaattcgttacccgat
tctggcgtgatcgaattcttaagcaccggcagagtatcacaggaccacaaagacttcaaa
acatttagctataaaccctgtttagaaaagatcctcagctgtgataaaccaaatgatttt
acgcattccttcaaattagcttcagcatataatgatgagattatggcgttcaccaattac
acgtttgaatttaagggcatcattgactatattttctatacaaaaaatacaatgacacct
ctaggccttcttggtccgatatcacaagaatggctgacacaaaataaagtcataggttgt
cctcatcctcatgtctactctgatcatttcccactacttgtggaacttgaaatggtaccg
acgataccttcgccaatgaatggaatcatcaggattgtacaagtaacaaataaccagaca
aatagaaaaagtagaaagggttatataaaagcgccttataagaaataa
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