Rhynchophorus ferrugineus (red palm weevil): 143192446
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Entry
143192446 CDS
T11283
Symbol
fand
Name
(RefSeq) pre-mRNA-splicing factor SYF1 fand
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
rfg Rhynchophorus ferrugineus (red palm weevil)
Pathway
rfg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rfg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
143192446 (fand)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rfg03019
]
143192446 (fand)
03041 Spliceosome [BR:
rfg03041
]
143192446 (fand)
Messenger RNA biogenesis [BR:
rfg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
143192446 (fand)
Spliceosome [BR:
rfg03041
]
Complex B
Other components
Prp19-related factors
143192446 (fand)
Complex C
143192446 (fand)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_2
TPR_12
TPR_8
TPR_15
Mad3_BUB1_I
TPR_10
TPR_7
RPN7
ARM_TT21
TPR_1
PPR
NRDE-2
Mad3_BUB1_I_2
DHR-2_Lobe_A
ARM_TT21_C
Motif
Other DBs
NCBI-GeneID:
143192446
NCBI-ProteinID:
XP_076253918
LinkDB
All DBs
Position
Unknown
AA seq
854 aa
AA seq
DB search
MPIKEPIKDIPMEIVFTDEDLPYEEEILRNPYSVKHWLRYIDHKKKAPKYGVNLIYERAL
KELPGSYKLWYNYLRTRRQQIKNRCITDPGYEEVNNAFERALVFMHKMPRIWMDYCTFLT
DQNKITRTRKVFDRALRALPVTQHHRIWPLYLDFVKKHDIPETAVRVFRRYLKLSPENAE
EYVDYLNSVGRLDEAAIILGKIVNDENFVSQYGKSKHQLWNELCELISNNPDKVQSLNVD
AIIRGGLRRYTDQLGHLWNSLANYYVRSGLFDRARDIYEEAIQTVTTVRDFTQVFDAYAQ
FEELSLSKRMEQVSKISNPTEDVNIDLDLKLARFENLMERRLLLLNSVLLRQNPHNVQEW
HKRVQLYEGKPHEIINTFTEAVQTVEPRLAVGKLHTLWVEFAKFYEKNGQVDDSRTIFEK
AIEVSYVKVDDLASVWCEWAEMEIRNENYEEALKLMHRATTLPARKVAYHDDSETVQDRL
YKSLKVWSMYADLEESFGTFKSCKAVYDRIIDLKIATPQIIINYGVFLEENNYFEEAFRA
YEKGISLFKWPNVYDIWNTYLSKFLKRYGGTKLERARDLFEQCLEKCPPQFAKNLYLLYA
KLEEEHGMARHAMAVYERATKAVPEKEMFEVFNIYIKQAAEIYGIPKTREIYKKAIEVLP
DDKTRDMCLRFADMETKLGEIDRARAIYDYCSQICDPRVTAEFWQTWKEFEVRHGNEDTM
REMLRIKRSVQAMYNTQVNMMSAQMLSSAAALTGTTADLAPGEKDGMRLLEARAVEMAGS
SGLGSRTGNIMFVRGETQGDKKDKVVNPDEIDIGDDDEDDDDDAEVEVPLEKQSIPSEVF
GSLKKTGEDEDDDD
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgccaataaaagaacctattaaagatatcccaatggaaattgtttttacagatgaagat
ttgccctatgaagaagaaatcttaaggaatccttattctgttaaacactggttacgatat
attgatcataaaaagaaggcccctaaatatggtgtaaatttaatttatgaaagagcttta
aaagaactgccaggatcatacaaactttggtataattatctaagaaccagaaggcagcaa
ataaagaacagatgcataacagatccaggttatgaagaagtaaataatgcttttgaaaga
gcattggtttttatgcataaaatgcctagaatttggatggattattgtacatttttaact
gatcaaaataaaataactaggaccaggaaagtatttgatagagcattaagagcattgcct
gtaacacaacatcatcgaatttggccattatacttagattttgtcaagaagcatgatata
cctgaaactgctgttagggtatttagaagatatttgaagttatctccagaaaatgcagaa
gaatatgtagattatttaaatagtgttggcagattagatgaggctgctattattttagga
aagatagttaatgatgaaaattttgtatctcagtatggcaaatcaaaacatcagttatgg
aatgaattatgtgaattgatatcaaataatcctgataaagtacaatctttaaatgttgat
gctattattcgaggaggtctaagaagatatactgatcagttggggcatttgtggaactca
ttggctaactattatgttagaagtggactttttgatcgtgcaagagatatttatgaggaa
gctattcaaacagtaacaacagttcgtgattttacacaagtttttgatgcctatgcacaa
tttgaagaattgagtttaagtaaaagaatggaacaggtttcaaagataagtaatccgaca
gaagatgtaaatattgatttagatttgaaattagcaagatttgaaaatcttatggaacgt
agattattacttttaaactcagtgttattaagacagaatcctcataatgtacaagagtgg
cataaacgtgttcagctttatgaaggaaaacctcatgaaatcataaatacttttacggaa
gctgtacaaactgttgaacctagattagctgtgggaaaattgcatacattgtgggtcgag
tttgctaagttttatgaaaaaaatggccaagttgatgattcccgtactatttttgaaaaa
gctattgaggtatcatatgtaaaagtagatgatttagcttctgtgtggtgtgaatgggca
gaaatggaaataaggaatgaaaattatgaagaagctttaaaattaatgcacagggcaaca
acactgcctgcgagaaaagttgcttaccatgacgattctgaaacagtgcaagacagattg
tataaatcactgaaagtttggtctatgtatgcagatttagaagagagttttggtactttt
aagtcttgtaaagcagtttatgatcgaataattgacttaaaaattgctacacctcaaata
attattaattatggtgtctttttggaagagaataactattttgaggaggccttccgggca
tatgaaaaaggaatatcattgtttaagtggcccaatgtttatgatatttggaatacctat
ttatctaagtttctaaaaagatatggaggtacaaaattagaaagagctagagatttattt
gaacagtgtttggagaaatgtccgcctcagtttgcaaagaatttatatttattatatgct
aaacttgaagaagaacatggcatggctagacatgcaatggcggtctatgaaagagcaaca
aaagcggttcctgaaaaagagatgtttgaggtattcaatatttatattaaacaagcagcg
gaaatttacggtataccaaaaaccagagaaatttacaaaaaggcaattgaggtcctacca
gatgacaaaacaagagatatgtgcttacgttttgctgatatggaaacgaaacttggagag
atcgatagagctcgcgccatttatgattattgtagccaaatttgtgacccaagggtaacg
gcagaattctggcaaacttggaaagaatttgaagttagacatggtaatgaagacactatg
agagaaatgttgagaattaaacgaagcgttcaggccatgtataatacacaggtaaatatg
atgtcagcacagatgttaagttctgctgctgctctcactggtactacagctgatttagca
ccaggggaaaaggatggtatgcgacttctagaagccagagcagtggagatggcagggtct
tcaggattaggctccagaacaggaaatattatgtttgtcagaggtgaaacccaaggggac
aagaaagataaagtagtcaatccagacgaaattgatattggcgatgatgacgaggatgac
gatgatgatgcggaagttgaagtacctcttgagaagcaaagcattccatctgaagtattt
ggtagtttgaaaaaaacaggagaagatgaggatgatgatgattaa
DBGET
integrated database retrieval system
