Rhynchophorus ferrugineus (red palm weevil): 143193200
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Entry
143193200 CDS
T11283
Symbol
trp
Name
(RefSeq) transient receptor potential isoform X1
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
rfg Rhynchophorus ferrugineus (red palm weevil)
Pathway
rfg04745
Phototransduction - fly
Brite
KEGG Orthology (KO) [BR:
rfg00001
]
09150 Organismal Systems
09157 Sensory system
04745 Phototransduction - fly
143193200 (trp)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rfg04040
]
143193200 (trp)
Ion channels [BR:
rfg04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
143193200 (trp)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank
Ank_3
PKD_channel
Ank_4
Ank_5
Clc-like
Motif
Other DBs
NCBI-GeneID:
143193200
NCBI-ProteinID:
XP_076255349
LinkDB
All DBs
Position
Unknown
AA seq
1118 aa
AA seq
DB search
MTSESQENLLENFEESFDHSSLKKDPVERPLSEIEKAFLLYAERGDCATVKRIIEQYKSK
PSEFDINCVDPLTRSALISAIENENIELIKLLLQEGIEVKDALLHAIKEEYVEGVEVLLN
WEEQSHKEGEAYSWEKVDKSGASFTTDITPLILASHKNNYEIIKLLLDRGATLPMPHDVR
CGCDDCVFSTKSDSLRHSQSRINAYRALSSPSLISLSSSDPLLTAFELSWDLRRLSQMET
EFRNDYSEMRSQVQNFACSLLDYVRTSQELEIILNYDTDGEIWSIGERQTLERLKLAIKY
KQKKFVAHANVQQLLASIWYEGLPGFRRKNVVGQSIQVAKLGAMFPLYCGAYLVAPNSTM
GQFMKKPFVKFIVHSASYGFFLTLLGAASQRVEIVVLEYLGSKYVQDMVDEWQRKERGAL
FGLAECGVILYVVSLIWAEIRSLWADGLMEYISDLWNIVDFITNMMYVFWLVLRLTSWYI
CWRDDHLGKHTWYPREEWDTFEPMLLSEGAFAAGMIFSFLKLVHIFSVNPHLGPLQISLG
RMIIDIVKFFFIYTLVLFAFGCGLNQLLWYYAELEKNKCYHLHNGLPDFDNNDKACTIWR
RYANLFETSQSLFWASFGLVDLMCFELTGIKGFTRFWALLMFGSYSVINVIVLLNMLIAM
MSNSYQIISERSDTEWKFARSRLWISYFDDGDSLPPPFNIIPPPKVIMRSMGCKKRNISS
ASFKNKSKEVARERYEAIMKLLVRRYVTAEQRKRDDFGITADDVMEIRQDISSLRYELIE
ILRKNGMETPTITIEETQISGKKTKTMERRILNDFHIGITESLVNEIQMNLKESKNVFVE
LARALKRRNSSKASKRNWNELVKKNKSDPIGSAQEAEQLRLRRQSLRQYIISNANEGPVE
DEKLIEYNPKLGELPKGARRAYVKFMSKKIEEDYKTDSKPTDVLPETESRAIRLMSKKIK
RSIKSDASSEEKGASTSGSELKPILTKSIKEETKVEEASSTKDILSDDIKDVSEKDGLVK
PMEFTTKTEDVKPAVNQSINENVVIDDEKEKKVEEEPQTSQILPQAEVKAEEPVKPAPPA
DVKPSSSTTPPSVPVVSEEPPKPKPISSKLKRTHLDWI
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgacttctgagtcccaggagaaccttttggaaaatttcgaggaatccttcgatcacagt
tcgctgaagaaggatccggtggagagacccctgtctgaaatcgagaaagcctttttgctc
tatgccgagagaggtgattgcgcaactgtaaaaaggataatagaacagtataagtccaaa
cccagtgaatttgatataaactgtgtagatcctttgaccagatcagctctaatttcagct
atagaaaatgaaaatattgagttaattaagttgcttctacaagaaggaattgaagttaaa
gatgcgcttttgcatgccattaaagaggaatatgttgagggagtagaggtgttgcttaat
tgggaggaacagagccacaaagaaggcgaagcatacagctgggagaaagtggataaatca
ggagcatcctttacaactgatattacaccattgattttggcttcccataaaaataattac
gaaataattaagctcctcttagaccgcggagcaaccttgccgatgcctcatgatgttcgg
tgtggatgtgatgattgtgtcttttcaacaaaatcagactctctacgacattcccaatca
agaataaatgcttaccgagctctctcatcgccatcgcttatttctttgtcgtctagcgat
cccttgttaacagcttttgaactgtcttgggatttaagacgactaagccaaatggaaacc
gaatttcgaaatgattacagtgaaatgagaagccaagtacaaaattttgcttgttcctta
ttggattatgttcgaacttcccaagaactggaaataatactgaattatgataccgatggt
gagatttggtcgataggagaaagacaaacattggaacgattgaaacttgctataaaatat
aaacagaaaaagtttgttgctcatgcaaatgttcagcaacttcttgcttcaatctggtac
gaaggattaccaggcttcagacgaaaaaacgttgttggccagtccatacaagttgctaaa
ttgggcgccatgtttcctctttattgtggtgcttatttggtagcgccgaattcgaccatg
ggacagtttatgaaaaaacctttcgtcaagtttatcgtacattcagcttcctatggattc
tttctgactcttctgggagcagcatctcaaagagttgaaatagttgttctagagtacctt
ggatctaaatatgtgcaagatatggttgatgagtggcaacgaaaagagcgaggtgccctt
tttgggcttgctgagtgtggggttatactgtatgtagtaagtttaatatgggcagaaatt
aggtctttatgggctgatggtctcatggagtatatatcagatttatggaatattgtggac
tttattaccaatatgatgtacgttttctggctagtactgaggctgacctcgtggtatata
tgttggagagatgaccatttgggaaaacatacgtggtatccaagagaagaatgggatacc
tttgagcctatgcttttatccgagggagcttttgcagctggtatgattttcagtttcttg
aaattggtacatatattcagcgttaatccgcatctggggcctcttcagatatctctaggt
cgtatgattattgatattgttaaattcttcttcatttatacgctcgttctttttgctttc
ggctgtgggttgaatcagttactgtggtactatgctgagttggagaagaataaatgttac
catctgcacaatggtttgcctgatttcgataataatgacaaagcttgtactatttggaga
agatatgccaacctatttgaaacatcacagtctttgttttgggcgagttttggtttggtt
gatttaatgtgtttcgaattgacaggtattaaagggtttacacgattttgggctctgtta
atgtttggttcttactcggtaatcaatgtgatagtgcttttgaatatgcttattgctatg
atgagtaattcatatcaaattatttcggaacggtctgataccgaatggaagtttgctaga
agccgtttatggatcagttattttgatgacggggattctttgccaccaccattcaacatt
ataccgccaccgaaagttattatgcgctctatgggttgcaaaaaacgtaatataagttcc
gctagcttcaaaaataaatcaaaggaagtagctagagaacggtatgaagctattatgaaa
ctattagtaagacgatacgttaccgctgaacagcgaaagcgtgatgattttggaattacg
gctgatgatgttatggaaatacgtcaagatatatcatcattgcgttacgaattaatcgag
atattgaggaaaaatggaatggaaactcctactataacaattgaagaaacacaaatttct
ggaaagaagacgaaaactatggaacgtcgtattcttaatgatttccatattggcattacc
gagagcttagtgaacgaaatccagatgaatctaaaggagtcgaagaacgtgttcgtagag
ttggccagggctttaaagcgtaggaatagttcaaaggcaagtaagcgaaattggaacgaa
ctggtgaagaagaacaagagtgatccaattggatcggcccaagaagcggaacagttacgg
ttaaggagacagagtttgagacaatatattatttcgaatgcgaatgaaggaccagttgaa
gatgaaaaattgatagagtacaatcctaaacttggcgagctgcccaaaggagctaggcgt
gcatacgtcaaattcatgtcgaaaaagatagaagaggattacaaaactgattcaaaacca
actgacgtgcttcccgaaactgaatcaagagcaatcagactaatgtcgaagaaaattaaa
cgcagcattaagtctgatgcaagttcagaggaaaaaggcgcttcgacctcaggttctgag
ttaaagcccatattaactaaatccatcaaagaagagaccaaggtggaagaggcgtcatca
acaaaggatattttatcggatgatatcaaagatgtcagcgaaaaagatgggttggttaaa
ccgatggagttcactactaaaactgaagatgtgaaacctgctgtgaatcagtctataaat
gaaaatgttgtgatagatgacgaaaaagaaaaaaaagttgaggaggaaccccaaaccagt
caaattttacctcaagcagaagttaaagcagaagagccagtaaaaccagcacctccagct
gatgtgaaaccaagttcatccactacacctccgtcagttccagtagtctctgaggaacct
cctaaacctaaacctatctcgagcaagttgaaaagaactcatttagattggatttag
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