Rhynchophorus ferrugineus (red palm weevil): 143193324
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Entry
143193324 CDS
T11283
Symbol
RfC4
Name
(RefSeq) replication factor C subunit RfC4
KO
K10755
replication factor C subunit 2/4
Organism
rfg Rhynchophorus ferrugineus (red palm weevil)
Pathway
rfg03030
DNA replication
rfg03410
Base excision repair
rfg03420
Nucleotide excision repair
rfg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rfg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
143193324 (RfC4)
03410 Base excision repair
143193324 (RfC4)
03420 Nucleotide excision repair
143193324 (RfC4)
03430 Mismatch repair
143193324 (RfC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rfg03032
]
143193324 (RfC4)
03036 Chromosome and associated proteins [BR:
rfg03036
]
143193324 (RfC4)
03400 DNA repair and recombination proteins [BR:
rfg03400
]
143193324 (RfC4)
DNA replication proteins [BR:
rfg03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
143193324 (RfC4)
DNA Replication Termination Factors
ELG1-RFC complex
143193324 (RfC4)
Chromosome and associated proteins [BR:
rfg03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
143193324 (RfC4)
DNA repair and recombination proteins [BR:
rfg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
143193324 (RfC4)
Check point factors
HRAD17(Rad24)-RFC complex
143193324 (RfC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_assoc_2
AAA_14
Mg_chelatase
AAA_16
AAA_22
Rad17
RuvB_N
AAA_24
Viral_helicase1
AAA_18
nSTAND3
AAA_5
AAA_19
AAA_11
DNAX_ATPase_lid
NTPase_1
Gp44_lid
MeaB
AAA_3
ABC_tran
AAA_28
ResIII
MipZ
AAA_2
RNA_helicase
SRP54
MCM
AAA_25
CbiA
AAA_7
DUF1217
Motif
Other DBs
NCBI-GeneID:
143193324
NCBI-ProteinID:
XP_076255596
LinkDB
All DBs
Position
Unknown
AA seq
351 aa
AA seq
DB search
MQASEIVEKMDIDSGFSSNSKCKEESTKKHNNLPWIEKYRPQSFEEIMGNEETTTRLSIF
AKEGNVPNIIIAGPPGVGKTTTILCLARILLGQAFKEAVLELNASNDRGIDVVRNKVKMF
AQQKVTLPPGRHKIIILDEVDSMTEGAQQALRRTMEIYSNTTRFALACNYSEKIIEPIQS
RCAIIRYTKLSDAQVLARVMQICEKENVNYTEDGLEAIVFTAQGDMRQALNNLQSTHNGF
EVVNSENVFKVCDEPHPMLIKDMLKSCSQGDIRKAYKIMEHFWNLGYAAEDIIKNVFKVC
KNMDMEEALKLAFIKEIGVTHKRIVEGLTTLLQMSGLLSRLCMATNRFQQN
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcttctgaaatagttgagaaaatggatatagattcgggtttttctagtaactca
aaatgtaaagaagagtctactaaaaaacataacaatcttccttggatagaaaaatatcgg
cctcaatcatttgaagaaattatgggtaatgaagaaaccacaactcgtttatcaatattt
gcaaaagaaggcaatgtacctaacattattattgcgggtccaccaggagttggaaagaca
actaccattctctgtttggctagaatattattaggacaagcatttaaagaagctgtcctt
gagctaaatgcttcaaatgataggggtattgatgtagtaagaaataaagtaaaaatgttt
gcccaacaaaaagtgactttaccaccagggaggcataaaataataatcttggatgaagta
gatagtatgactgaaggtgcccaacaagctcttcggcgaacaatggaaatttatagcaat
accactcgttttgcattggcttgtaattacagtgaaaaaattattgagcctattcaatca
cgttgtgctataataagatataccaagttatctgatgcacaagttttagctagagttatg
caaatatgtgaaaaggaaaatgtaaactatactgaggatggtctggaagctattgtcttt
actgcacaaggagatatgaggcaagcattaaataatcttcaatctactcataatggtttt
gaagttgtaaattcagaaaatgttttcaaagtttgtgatgaacctcatcctatgcttatt
aaagatatgttgaaaagttgttcacaaggagacataagaaaggcttataaaataatggaa
catttttggaatctcggttatgctgctgaagatattattaaaaatgtatttaaagtttgt
aaaaatatggatatggaagaagcactaaaattagcctttataaaggaaattggagtaact
cataaacgtatagtggaaggcttaactactttactccaaatgtctggtcttctatcaagg
ctttgtatggcaacaaataggtttcaacaaaattag
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