Rhynchophorus ferrugineus (red palm weevil): 143194469
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Entry
143194469 CDS
T11283
Symbol
rad50
Name
(RefSeq) DNA repair protein rad50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
rfg Rhynchophorus ferrugineus (red palm weevil)
Pathway
rfg03440
Homologous recombination
rfg03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rfg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
143194469 (rad50)
03450 Non-homologous end-joining
143194469 (rad50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rfg03032
]
143194469 (rad50)
03400 DNA repair and recombination proteins [BR:
rfg03400
]
143194469 (rad50)
DNA replication proteins [BR:
rfg03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
143194469 (rad50)
DNA repair and recombination proteins [BR:
rfg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
143194469 (rad50)
BRCA1-C complex
143194469 (rad50)
NHEJ (non-homologous end-joining)
MRX complex
143194469 (rad50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_15
SMC_N
SbcC_Walker_B
AAA_21
AAA_29
AAA_27
AAA_16
ABC_tran
Motif
Other DBs
NCBI-GeneID:
143194469
NCBI-ProteinID:
XP_076257422
LinkDB
All DBs
Position
Unknown
AA seq
1304 aa
AA seq
DB search
MALLEKLSICGIRSFGPSTEEKIKFSTPLTLILGQNGCGKTTIIECLKFALTGDVPSGTG
TGAGFVNDPNLSNRRSTKCSVKVKFKDCRGDYITIGKFAEVSLQGEKQMKFKSISPSVRW
EESSGNGHIEDISSRCADINSYCSQKLNVSKAMLNNVIFCHQENSAWPLDEGKKLKEKFD
EIFGSSEYNKCVDKVRKIIQTKTNNLKVLKEQLAHKDTIKNNVEQLQKSILLKSEQLSLI
ETFIKEKHKHLQPLQNRINEICKLEDEYNIICQDLAGLQKTYEALITRNEDLTKYIKIEY
KGSDEELDNEIKNFNKNQENTKKHITEMEQKKNVLESKVKNCDEDLKQLNVDCSKIMWEK
DLYNKALEKLNDLIEKSRVKFKVIAESDETHSEAVDKLKNVLSSEKFNLEKLQENNEITE
REKQEDIDKIREKLAATKHDLKSKKEAIIQHQRKINEYNQKINNLAYSAQQLKEANKKIN
ELEADLASIKSDFNEFEFQLEIDRLESQLSEREEHCKKLDREYEMLKQNRVIEHSIEKEK
NLIIAKKAEIEEIRQRCDDDFKLLFASDMPKTNFQQSVKNIQCEQDKKLIEINECISKSE
KELSSLETEVKNTKDTLREFKNQLKINIDKIEDQCKGKPFSQVLKQTYQKKEELQNETGA
YRSEITLFDKYITKFQQESPCCPVCQTNFSQNRFAVPKIIQRLQQEIELLPSKLDQTETE
LKQEEEAYNKLQQLKPINDEISILQKTKIPDLQLKLQNQEENLNEKRVELAASREDKKNP
MKLLEASKKVLSDVVVLDRLINEINCSEELLVNLENKLIKVSSNRTLNQTELELRKVKVE
LDDIRGMLKSKKNNFDMSKDHIQRVEKSLQVEKQKKANIESGTKEQPWLEKEIKNYSQNI
SDLEMEVHDLEDAIQCRFGELQNAEKVKAEIVTNNKIKLETMRTKIEDYGKNLNDISKLV
NEVVYYEKSINSNNLQDILKKIDQKKSDIDKLQQAKKMLETKIAEKHQEEANQISKMRSL
TDNQELRKNRKKGMELKNQIDELNGKIKGIGSNKSIVDEKIKLEGEISSLEREINVKIGE
QERIKDDIEEKQKEVNKKENREAFEQHRYKFYEVQIEQLSITDLDRYVKVLENSILKFHQ
QKMEYINRTIRDLWRNIYKGNDIDYIEIQADGNVGGSKRRNYSYKVVQVKRGVELEMRGR
CSAGQKVLSCLVIRIALAETFSTHCGILALDEPTTNLDRENIDSLCDALSNIITSRQTNS
SFQLLIITHDEEFIRTLTRNQSVSHYYRVYRNTDGFSQIKREIL
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
atggcattattggaaaaactgagtatttgtggaattcgtagttttgggcctagtactgaa
gaaaagataaaattttctacacctttaacacttattttaggccaaaatggatgtggaaaa
acaacaattattgaatgtttaaaatttgctctaactggtgatgtaccttccggaacaggc
actggagctggttttgtgaatgatccaaacttatcaaacagaagatcaaccaaatgctct
gttaaagtaaaatttaaggactgcaggggtgattacattaccattggtaaatttgcagag
gtgtctttgcaaggtgagaaacagatgaaatttaagagtataagtccatctgttcgatgg
gaggaatccagtggtaatggacatatagaggatataagcagccgatgtgctgatattaat
tcttattgttctcaaaaattaaatgtttctaaagctatgttgaataatgttatcttttgt
catcaagaaaattctgcttggcctctagatgagggtaaaaagttaaaagagaaatttgat
gaaatatttggttcatctgaatataacaaatgtgtggataaagtgagaaaaattattcaa
acaaaaacaaacaacctaaaggtgttaaaagaacaacttgcgcataaagatactattaag
aataatgttgaacagttacaaaagtctatattactaaaaagtgaacagttgagtcttatt
gaaacatttataaaagaaaaacataaacatttacaacctttacaaaatagaattaatgaa
atttgcaaacttgaggatgaatataacattatctgtcaagatttagcaggactacaaaaa
acttatgaagctttgatcactagaaatgaagatttgacgaaatatataaaaattgaatat
aaaggttctgatgaagagttagataatgaaattaaaaattttaacaaaaaccaagaaaac
actaagaaacatattactgaaatggaacagaaaaaaaatgttctggaatctaaagtaaaa
aactgcgatgaagatttgaagcagttaaatgttgactgtagtaaaattatgtgggaaaaa
gacttatataacaaagcattagaaaaattgaatgatctaattgagaaatccagagtcaag
tttaaggtaatagctgaaagtgatgaaacccatagtgaggcagttgataaattgaaaaat
gtactaagctcagaaaagtttaatttagagaaattacaggagaataatgaaattacagaa
agggaaaagcaagaagatattgataaaatacgagaaaaattagcagcaacaaaacatgat
ttaaaatcaaagaaagaagcaatcatacaacaccagaggaaaattaatgaatataatcaa
aaaataaataatttggcttattctgctcaacaactgaaagaagctaataagaaaattaat
gaattggaagcagatttggctagtattaaatctgacttcaatgaatttgaatttcaatta
gaaatcgataggttagaaagccaattaagtgaaagagaagaacattgtaaaaaactcgat
agggaatatgagatgttaaagcaaaatcgagtaatagaacatagcattgagaaagaaaag
aatttgattattgcaaagaaagcggaaatcgaggaaattcgacagcgatgtgatgacgat
tttaaattattattcgctagtgatatgcctaaaaccaatttccagcagtcggtcaaaaat
attcaatgcgaacaggataaaaagttgatagagatcaatgaatgcatttcgaaatcggaa
aaggaacttagttctctagaaaccgaagtaaaaaatacaaaagatactttgagagaattc
aaaaaccagttaaaaattaacattgataaaattgaggatcaatgtaaaggaaaaccattt
tcccaggtgttgaagcaaacatatcagaagaaagaagaacttcaaaatgaaacaggagct
tatcgttcagaaataacattattcgataaatatataactaaatttcaacaggaatcaccc
tgttgtcctgtttgccaaacaaatttttcccaaaacagatttgcagttcccaaaattatt
caacgactacaacaggaaattgaactacttccgtctaaattagatcaaactgaaacggaa
ttgaaacaagaagaagaagcatataacaaattgcaacaactcaaaccaataaatgatgaa
atatccatacttcagaaaacgaaaattcccgatcttcaattgaaacttcagaaccaagaa
gaaaatttgaacgaaaagagagtggagttagcagcatccagagaagataaaaaaaatcct
atgaaattactagaagcgtctaaaaaagttttgtctgatgttgttgtattagatcgcttg
attaatgaaataaactgctctgaagaattattagtgaacttagaaaataaactaattaaa
gtatcttcaaatcgtactttaaaccaaactgaattggaactcagaaaagtaaaagtagaa
ctagatgatattcgcggtatgctcaaatctaaaaaaaataactttgatatgtccaaggat
cacattcaaagggttgagaagtctttacaagttgagaaacaaaaaaaagctaacattgaa
tcgggtacgaaagaacaaccgtggttagaaaaagaaattaaaaattatagtcaaaatata
tctgatcttgaaatggaggtacatgatttagaggatgccattcaatgcaggtttggggaa
cttcagaatgctgagaaggttaaagctgaaattgtaactaacaacaagattaaattggaa
acaatgcgtaccaaaattgaagattacgggaagaatttaaatgatatatcgaaattagtt
aatgaggtggtgtactatgaaaaatccatcaatagcaataatcttcaagatattttaaag
aagattgatcaaaagaaatctgatattgacaaacttcaacaagccaaaaaaatgttggaa
acgaagattgcagaaaaacatcaggaagaagccaatcagatcagtaaaatgcgatcgcta
acagataatcaagaacttcggaaaaatcggaagaaaggcatggaattgaagaaccaaatt
gatgaattgaatggaaagataaaaggaattgggagtaataagtcgattgtagatgaaaag
atcaaacttgaaggtgaaatatcctccttagaaagggaaataaatgtaaagattggcgaa
caggaaagaatcaaggacgatattgaagagaaacaaaaagaagttaataaaaaggaaaat
cgcgaagcttttgaacaacatcgttataagttttacgaggttcaaatagaacaactttct
ataacagacttggatagatatgtgaaagttttggagaatagcattttaaaatttcatcaa
caaaaaatggagtatatcaacagaacaataagggatttatggagaaacatatacaaagga
aatgatatagattatattgaaattcaagctgatggaaatgttggaggtagtaagagaaga
aactatagttacaaagttgttcaggtcaagagaggtgtcgaactagaaatgagaggacgt
tgtagtgctggtcaaaaagtgctttcttgtttagttattagaattgccctagcggaaaca
tttagcacacactgtggcattctagcccttgatgaacctaccaccaatttagatagagaa
aatatagatagtctttgtgatgctttatccaatattattacctccagacaaacaaatagc
agttttcagttgttgattattactcatgatgaggaatttattcgtacattgactagaaat
cagagtgtgtcacattactatagagtctataggaatacagatggattctcccaaattaaa
agggagattttataa
DBGET
integrated database retrieval system
