KEGG   Rhynchophorus ferrugineus (red palm weevil): 143195075
Entry
143195075         CDS       T11283                                 
Symbol
Smu1
Name
(RefSeq) smu1 spliceosomal factor
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
rfg  Rhynchophorus ferrugineus (red palm weevil)
Brite
KEGG Orthology (KO) [BR:rfg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rfg03041]
    143195075 (Smu1)
Spliceosome [BR:rfg03041]
 Complex B
  Other components
   Complex B specific factors
    143195075 (Smu1)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR36-Utp21_1st EIF3I WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_EML WD40_Gbeta LisH_TPL Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_VPS8 NBCH_WD40 Beta-prop_DCAF4 Beta-prop_Aladin Beta-prop_ACSF4 Beta-prop_RIG_2nd Beta-prop_WDR41 Beta-prop_Nup120_160 WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_NWD2_C Beta-prop_NUP159_NUP214 Ge1_WD40 Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_SCAP Beta-prop_HPS5 Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_IP5PC_F eIF2A Beta-prop_LRRK2 VPS8_N Beta-prop_WDR11_2nd DUF7899 KNTC1_N PALB2_WD40 zf_topless
Other DBs
NCBI-GeneID: 143195075
NCBI-ProteinID: XP_076258044
LinkDB
Position
Unknown
AA seq 510 aa
MSIEIESADVIRLIQQYLKESNLFRTLHTLQEETGVTLNTVDSVDGFCADINNGHWDTVL
KAIQSLKLPDKKLIDLYEQIVLELIELRELGAARSLLRQTDPMIMLKQNEPERYIHLENL
LARSYFDPREAYPDGSSKEKRRAAIAHALSGEVSVVPSSRLLALLGQALKWQQHQGLLPP
GTTIDLFRGKAAVREQEDETFPTQMAKQIKFGQKSHVECARFSPDGQYLVTGSVDGIIEV
WNFTTGKIRKDLKYQAQENFMMMEHAVLCMAFSRDSEMLVSGSQTGRIKVWRISTGQCLR
KIEKAHTKGITCLQFSRDNSQVLSASFDHAIRIHGLKSGKTLKEFRGHTSFVNEVIFTQD
GHNILSASSDGTVKVWSIKTTECINTFKSLGSSDCTVNNIHNFAKNPEHFVVCNRSNTVV
IVNLQGQIVRSFASGKRQGGDFVCSTVSPRGDWIYCVGEDMVLYCFSTVSGKLERTLNIH
EKDVIGIAHHPHQNLLCSYSEDGLVRLWKP
NT seq 1533 nt   +upstreamnt  +downstreamnt
atgtctatagaaatagaatctgcagacgttattcgtcttattcaacagtatttaaaagaa
tcaaacttatttagaacattacacacccttcaagaagaaactggtgtaacattaaatact
gttgacagtgtagatggattttgtgcagatataaataatggacactgggatactgtattg
aaagctattcagtccctcaaattaccggataaaaagttaattgatctatatgaacagatt
gttttagaacttattgaattgagggaattaggagctgctaggtcattattacgtcaaact
gacccaatgattatgttaaaacagaatgaacctgaaagatacatacatttagaaaattta
ttagcaagatcttattttgatccaagagaagcttaccctgatggaagtagtaaagaaaaa
agaagagcagctattgctcatgccctctcaggggaggtatctgttgtaccatcttcacgc
ttactagcattacttggacaagctttaaaatggcagcaacatcaaggtctacttcctcct
ggaaccactattgatttatttagaggaaaagcagcagttagagaacaagaagatgaaaca
tttcctacacaaatggctaagcaaatcaagtttggtcagaagtcccacgtagaatgtgca
aggttttctccagatggacaatatctggtaactggtagtgtggatggtattattgaagtt
tggaattttacaactggaaaaataaggaaggatttaaaataccaagctcaggaaaatttc
atgatgatggaacatgctgtgttatgtatggcattttcaagagacagtgaaatgttagtt
tccggatcacaaactggcaggattaaagtatggagaattagcactggtcagtgtttaaga
aaaatagagaaagcacataccaaaggcatcacttgtttgcagttttcaagagataatagc
caagtgttaagtgcatcctttgatcatgctataagaattcatggcttgaagtctggaaag
actttaaaagaattcagaggccatacatcttttgtgaatgaagttatttttacacaagat
ggtcacaatatattaagtgcttcctcagatggtactgttaaagtttggagcataaaaact
acagaatgtataaacacttttaaatcattaggatccagtgattgtactgtaaacaacatt
cataattttgcaaaaaatcctgaacattttgtagtttgcaatagaagtaacactgttgtt
attgttaatttacagggacagattgtgagatcctttgctagtgggaaaagacagggaggt
gattttgtatgttcaacagtttctccaagaggagattggatatattgtgtaggtgaagat
atggttttatactgtttctccacagtttctggtaaattagaaagaactttaaatatccat
gagaaagacgttattggtatagctcaccaccctcatcaaaatttgctctgttcttatagt
gaagatggtttggtaagactgtggaaaccataa

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