Rhynchophorus ferrugineus (red palm weevil): 143195394
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Entry
143195394 CDS
T11283
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
rfg Rhynchophorus ferrugineus (red palm weevil)
Pathway
rfg03013
Nucleocytoplasmic transport
rfg03015
mRNA surveillance pathway
rfg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rfg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
143195394
09122 Translation
03013 Nucleocytoplasmic transport
143195394
03015 mRNA surveillance pathway
143195394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rfg03019
]
143195394
03041 Spliceosome [BR:
rfg03041
]
143195394
03009 Ribosome biogenesis [BR:
rfg03009
]
143195394
03012 Translation factors [BR:
rfg03012
]
143195394
Enzymes [BR:
rfg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
143195394
Messenger RNA biogenesis [BR:
rfg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
143195394
mRNA cycle factors
Stress granule specific factors
143195394
Spliceosome [BR:
rfg03041
]
Complex C
Other components
EJC/TREX
143195394
Ribosome biogenesis [BR:
rfg03009
]
Eukaryotic type
90S particles
Helicases
143195394
Translation factors [BR:
rfg03012
]
Eukaryotic type
Initiation factors
eIF-4
143195394
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Cas3-like_C_2
AAA_30
TniB
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
143195394
NCBI-ProteinID:
XP_076258584
LinkDB
All DBs
Position
Unknown
AA seq
402 aa
AA seq
DB search
MATNKGRSSVYEDLSNVEFETSEDVEVIDKFSRMNLREELTRGIYAYGFEKPSAIQQRAI
RPIIKGRDVIAQAQSGTGKTATFSISILQTLDLTVRETQVLCLSPTRELAVQIQKVILAL
GDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVYDMIRRRALRTRSVKMLVLDEA
DEMLNKGFKEQIYDVYRFLPPSTQVVLISATLPHEILEITSKFMTDPIRILVKRDELTLE
GIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRESNFTVSCMHG
DMPQKERDNIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSG
RFGRKGVAINFVKSDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgaataaaggtcgaagctccgtttacgaagatttatccaatgtcgaatttgaa
actagtgaagatgttgaggtcattgataagttctcccgcatgaacctgagggaggaattg
acgaggggtatatacgcatacggttttgaaaaaccatcagccatccagcaaagagctatc
agaccgatcataaaaggcagagatgttattgctcaggctcaatccggaactggaaaaaca
gcaactttctccatttctattttgcaaacattggatttaacagtgcgtgaaacacaagtg
ttatgtttatcaccgacaagagagttggctgtacaaattcaaaaggttattttggctttg
ggtgatttcatgaatgttcagtgtcatgcctgcatcggtggaaccaatttaggagaggat
ataaggaaactggattatggtcaacatgtagtcagtggtactcctggtagagtgtatgat
atgatcagaagaagagctcttcgcaccagatcagttaaaatgctggttcttgatgaagcc
gatgagatgcttaacaaagggtttaaagaacaaatttacgatgtatacagattcttgcca
ccatccacacaagtagtattgatttctgctacattacctcatgaaattctggagatcacc
tcaaaattcatgactgaccccatcagaattctggtaaaacgtgatgaattgacactagaa
gggatcaaacagttctttgttgctgtggaaagggaggaatggaagtttgatacattgtgt
gatctgtatgatacactcacaatcacccaggctgtaatattttgtaataccaagaggaag
gtggattggttaaccgaaaagatgagggaaagcaatttcactgttagctgtatgcatggt
gatatgccccaaaaggagagagacaatattatgaaggaattcaggtcaggacaaagcaga
gttttgatcacaacagatgtttgggctagaggaattgatgtccaacaagtcagtttagta
atcaactatgacctcccgaacaatcgtgagttgtatattcacagaatcggcaggtcaggc
cgttttggaagaaagggtgtcgccatcaactttgtaaagtccgatgatattaggattttg
agagatattgaacaatattattcgacacaaattgacgagatgcctatgaacgtggccgat
cttatttaa
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integrated database retrieval system
