Rhynchophorus ferrugineus (red palm weevil): 143195547
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Entry
143195547 CDS
T11283
Symbol
Atg16
Name
(RefSeq) autophagy-related 16 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
rfg Rhynchophorus ferrugineus (red palm weevil)
Pathway
rfg04136
Autophagy - other
rfg04140
Autophagy - animal
rfg04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
rfg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
143195547 (Atg16)
04140 Autophagy - animal
143195547 (Atg16)
04136 Autophagy - other
143195547 (Atg16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rfg04131
]
143195547 (Atg16)
03029 Mitochondrial biogenesis [BR:
rfg03029
]
143195547 (Atg16)
Membrane trafficking [BR:
rfg04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
143195547 (Atg16)
Others
Specific organelles associated proteins
Auto phagosome
143195547 (Atg16)
Mitochondrial biogenesis [BR:
rfg03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
143195547 (Atg16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
ATG16
WD40
Beta-prop_THOC3
WD40_Prp19
Beta-prop_IFT122_1st
Beta-prop_WDR36-Utp21_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
EIF3I
WD40_Gbeta
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
DSE1_N
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_SCAP
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
eIF2A
Beta-prop_DCAF4
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_NOL10_N
Beta-prop_ACSF4
ASA1
CFAP251_N
PAC11
Beta-prop_VPS8
CCDC89
Rab11-FIP3
Rod_CreS
FKBP15
UCP007778
Ge1_WD40
Beta-prop_SPT8
CLIP1
CEP135_N
Beta-prop_WDR35_TULP_N
Sec20
KASH_CCD
Motif
Other DBs
NCBI-GeneID:
143195547
NCBI-ProteinID:
XP_076258919
LinkDB
All DBs
Position
Unknown
AA seq
571 aa
AA seq
DB search
MEMAEWRQTILFKLQNRNRKETYCFQDLIAQHNKVFESANALRNENLHLSIQNEKLRVEG
GGGSNSIAETRLSEEVQNLKQKLLSQTEELAELHKRKGENAQQIIDLNVKLQERDKMMST
KDVTIAESQSKIASLDAEVGMLTHANKELKHLNDVLRDEYQALQLAFNVLEEKLRKVQDE
NRQLVDRLIKYKAKDADRMNEENDNFLNDGSKPFTSKLSTFGIFRKRHAKMQKEIEEACR
DTRGVGSEDYQEGYGPISQSTLPTKVHVKFDGHEGEVNAVKWSPVDRIVVTGGADRKVKL
WDVSKGTQENKAILVGSNAGVMAVDFDTSGSLILGASNDYATRVWTVSDQRLRHTLTGHS
GKVMAAKFLGEASKIVTGSHDRTLKIWDLISRACVVTKFAGSSCNDLVTVDNAGSTIISG
HFDKTIRFWDSRSESSANNIVLNGKVTSLDLTRDAKHLLACVRDDTLKLIDLRMNHVINS
FSSEGFKVGCDWARATFSPDGQYVAVGSADGAVYIWGVTTGKVEKVLKEHGLPSFDLFCR
SAVTATAWHPYGTFLASVDKSKRTVIWVGDI
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggctgagtggcgtcaaacaattttgtttaaattacaaaacaggaataggaag
gaaacatactgtttccaggaccttatagcgcaacataacaaagtttttgaaagtgcaaat
gcattaaggaatgaaaatttacacctttctattcaaaatgaaaaacttcgtgtggagggt
ggtggtggtagtaatagcatcgcagaaactaggttaagtgaagaagttcagaatttaaaa
caaaaattacttagtcaaactgaagaattagctgagttacataagcgtaaaggtgagaat
gcccaacaaattattgatctgaatgttaaattacaagaaagagataaaatgatgtctacc
aaagatgtcactatagctgaaagtcagtcaaaaattgctagtttagatgcagaagttgga
atgcttacacatgcaaataaggaattaaaacatttgaatgatgtcctaagagatgaatat
caagccttacagttagcttttaatgtcttagaggaaaaattacgtaaagtacaagatgaa
aatagacagcttgttgacagattgatcaagtataaagccaaagatgcggatcggatgaat
gaggaaaatgacaactttttaaacgatggttccaaacctttcacttctaaactcagtact
tttggtatttttagaaaaaggcatgccaaaatgcagaaggaaattgaggaagcctgtaga
gatactagaggagttggctctgaggattatcaagaaggttatgggccaattagtcaatct
actttaccaactaaagtccatgttaaatttgatggacatgaaggagaagttaatgccgtt
aaatggagtccagttgatcgtatagtggtaacaggtggtgcagaccgtaaggtgaagctg
tgggatgtctccaaaggtactcaagaaaataaggcgatattagtggggagtaatgctgga
gtgatggctgttgattttgatacttcgggttctcttattttgggagcatccaatgattac
gctactagagtatggacagtgtcagatcagagattaaggcatacattgactggacattct
ggaaaggtcatggccgctaaattcttaggtgaagcatctaaaattgtgactggtagtcac
gatcgcacattgaagatttgggacttaataagcagagcttgtgttgtcacaaaattcgcc
ggatcaagctgtaacgacctggtaaccgtcgataacgcaggatccaccataatcagcggc
cactttgataagacgatacgtttctgggacagccgttccgaatccagcgccaataacatc
gtcctcaacggcaaagtgacctcgttagatctcacccgagatgccaagcacttgctcgcc
tgcgtcagggacgacacattaaaactgatcgatctcagaatgaaccatgtgattaattcc
ttcagttccgaaggtttcaaggtaggttgcgactgggccagggccacattcagcccggac
gggcaatatgtcgccgtgggatctgcggacggtgccgtttatatctggggggttacaacg
ggcaaagtggaaaaggtcctgaaggaacacggattaccatcttttgacctgttctgcaga
tcggccgtgaccgctacagcatggcacccctacggaaccttcttggccagcgtggataag
tctaaaagaactgttatatgggtaggggacatctaa
DBGET
integrated database retrieval system
