KEGG   Rhynchophorus ferrugineus (red palm weevil): 143195858
Entry
143195858         CDS       T11283                                 
Symbol
U3-55K
Name
(RefSeq) U3 small nuclear riboprotein factor 55K
  KO
K14793  ribosomal RNA-processing protein 9
Organism
rfg  Rhynchophorus ferrugineus (red palm weevil)
Brite
KEGG Orthology (KO) [BR:rfg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rfg03009]
    143195858 (U3-55K)
Ribosome biogenesis [BR:rfg03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    143195858 (U3-55K)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st WD40 Beta-prop_WDR5 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_EML_2 WD40_Prp19 WD40_CDC20-Fz Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_EML WDR55 Beta-prop_WDR36-Utp21_1st WD40_Gbeta WD40_MABP1-WDR62_2nd EIF3I Beta-prop_WDR75_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR41 Beta-prop_RIG_2nd Beta-prop_Vps41 NBCH_WD40 Beta-prop_HPS5 Beta-prop_CAF1B_HIR1 WDR90_beta-prop_4th Beta-prop_DCAF4 ANAPC4_WD40 Beta-prop_VPS8 Beta-prop_DCAF12 Beta-prop_TEP1_C Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_IP5PC_F Beta-prop_SCAP PEP5_VPS11_N WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_WDR75_2nd WD40_RFWD3 Beta-prop_WDR35_TULP_N WDR54 Beta-prop_WDR19_2nd Beta-prop_NUP159_NUP214 VPS8_N Beta-prop_IFT122_2nd PROPPIN
Other DBs
NCBI-GeneID: 143195858
NCBI-ProteinID: XP_076259454
LinkDB
Position
Unknown
AA seq 454 aa
MSFFIKGKQLSGTKRAKFSTQKIKKRKVQPKPSANDEITSSEDEDLVEDKTADISDSENE
HETAQEKKLRLAKVYLQEIEKEEKARLEKDEIDQSVLSKRLKEDYLKETGKLRLTVASNY
KRVDTINIKTLKCKQQKNTITCICISSDNNFLFSGSKDGLVVKYSLTDYKKVGCIPFIRQ
IGEEVLGNSSEVLCLAVSTNNKYLAIGDKNGKVNIWDPKGLKHIKTLIGHKNAILGVCFK
KESHTLYSCSRDKTIKVWSLDEMAFVETLFGHQDMVASIDSLYRDRVVTSGGHDLRIWKI
TEETQLIYNGHVGNIDIVRLINEEHFVSGSDDGQICIWSVMRKRPLQCLQNAHGKDLFNN
QPRWITALAALINTDLIASGSYDGFVRLWKLDKDFKSSLEVMKIRVQGVINSLVFTSDGK
ALLVGVSRDYRFGRWHTVKNAKNCILFIPFVIEC
NT seq 1365 nt   +upstreamnt  +downstreamnt
atgtccttctttataaaaggaaaacagttatctggaacgaaaagggcaaaattctctacc
cagaaaataaaaaaacgtaaagtccaaccgaaaccatccgcgaatgatgaaataaccagt
agcgaagatgaagatttagtggaagacaagactgcagatataagtgattccgaaaacgaa
catgagactgctcaagagaaaaaattgcgattagctaaagtatatttgcaagaaattgag
aaggaagaaaaagctagacttgaaaaggacgagatagatcaaagtgttctttcaaaaaga
ttgaaggaggattatttaaaagagactggaaaacttaggttaacagtagcaagtaattat
aaacgagtagatacaattaatataaagacgttaaagtgtaaacaacaaaaaaatactatt
acctgcatatgcatttcaagtgacaataatttcttatttagtggtagtaaagatggactt
gtagtaaagtattctttaacggactataagaaagtaggatgtatccctttcattagacaa
ataggagaagaagttttaggaaattccagtgaagtgttatgtttagctgtttctacaaat
aataaatatttagcaataggtgataaaaatggcaaagtgaacatttgggatccaaaagga
ctaaaacatataaagacattaattgggcacaaaaatgcaattcttggagtctgtttcaaa
aaggaatctcatactctttattcgtgcagtagagacaaaacaattaaggtttggagttta
gatgagatggcttttgttgaaactttatttggtcatcaagatatggttgcttcaatagat
agtctttatagagatcgtgtagttacttcaggtggacatgatttaaggatatggaaaatt
actgaagaaactcagttaatatacaatggtcatgtaggaaatatagatattgtgcgattg
attaatgaggaacattttgtttctggcagtgatgatggccaaatatgtatatggagtgtt
atgagaaaaaggccccttcagtgcttgcaaaatgcccatggtaaagatttgtttaataac
caaccaaggtggataacagcccttgctgcattgatcaatactgatttaatagcatctgga
tcttatgatggatttgtaaggttatggaagctggataaagatttcaagagttctttagaa
gtaatgaagataagagttcaaggtgtaattaattcattagtatttacatcagatgggaaa
gctcttttggttggagttagtcgtgattaccgatttggaagatggcatacagtaaaaaat
gctaaaaactgtatactttttataccttttgttatagaatgttaa

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