Rhynchophorus ferrugineus (red palm weevil): 143196171
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Entry
143196171 CDS
T11283
Name
(RefSeq) BRCA1-associated RING domain protein 1-like
KO
K10683
BRCA1-associated RING domain protein 1
Organism
rfg Rhynchophorus ferrugineus (red palm weevil)
Pathway
rfg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rfg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
143196171
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rfg03019
]
143196171
04121 Ubiquitin system [BR:
rfg04121
]
143196171
03036 Chromosome and associated proteins [BR:
rfg03036
]
143196171
03400 DNA repair and recombination proteins [BR:
rfg03400
]
143196171
Messenger RNA biogenesis [BR:
rfg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
143196171
Ubiquitin system [BR:
rfg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
143196171
Chromosome and associated proteins [BR:
rfg03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
143196171
DNA repair and recombination proteins [BR:
rfg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
143196171
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_4
Ank_3
Ank_5
BRCT_2
zf-C3HC4_2
zf-C3HC4
Ank_KRIT1
zf-C3HC4_3
zf-RING_2
zf-RING_UBOX
zf-RING_5
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
143196171
NCBI-ProteinID:
XP_076259949
LinkDB
All DBs
Position
Unknown
AA seq
497 aa
AA seq
DB search
MNLEDKILTFLNEFEDSLKCGICDENCKVAIRVKPCGHYFCQLCLKRHNSQCECPKCGSF
YIADDLDENNIAKQCNSYLQECRALLENSPKDEQKRVLRQIQASIKRNISAKRASIRKTK
QFGPHIIVTNNKKYCVNFTLVPTKKNPKGETPLHLACKRHKVDEVKRLLGQKVDINAKDY
AGWAPLHEAIQSGNLKIVQLLLQEGCLVDIPGPDYTSPLHKAISLDNLDMVQILLSYGAD
PNVADYNGLKPVDMTSNFQIKKSLESYTLRPNENIFNVYISSDIYLYCHCIDNEYKDILI
LNKSIHLLNKMEVREKLTHIALKKTHKMSFKILQGMLLGLQFIEQESLKNYVDGDYFIDI
PNYTFLENHEQLNNGIKKAMISSLLNLPKLFDGLSFHIEDHNIAVDVYHLKVDKEYLLRL
IEAGGGQILLRAPALRTCEIENIHPFYAPLHSKTYWCCNYIIYPENKAPKLLYNMKELQH
KTSRWLIDCIARFEICD
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgaatttagaagataaaattcttacatttctaaatgagttcgaagattccttaaaatgt
gggatatgcgacgagaactgtaaagttgcaattcgtgtaaaaccatgtggacattatttt
tgtcaactatgtttaaaaaggcataattcacaatgtgagtgcccaaagtgtgggtcgttt
tacatagcggacgatttagacgaaaacaatattgcgaaacaatgtaactcatatttacaa
gagtgccgagcccttcttgagaatagtcctaaagatgaacaaaaaagggttctcagacaa
attcaagcttctattaaacgtaatatatcagcaaaaagagctagtattaggaaaactaaa
cagtttggtcctcatataattgttaccaataacaaaaaatattgtgttaactttacgttg
gttcctaccaagaaaaatcctaaaggtgaaactccgttgcacttagcttgtaagaggcat
aaggtggatgaagttaaaaggcttttaggtcaaaaagttgatataaatgctaaagattat
gcaggttgggcacctcttcatgaggctattcaaagtggcaacttgaaaatagtgcaactc
ctgctacaggagggttgtcttgttgatatacctggtcctgattatacatctcctctgcat
aaggctatatctctggataatctggatatggtacaaatattacttagctatggtgcagat
cctaacgttgcagattacaatggtttaaaaccagttgacatgacatcaaacttccaaatt
aaaaaaagtttagaatcgtacacattaaggccaaatgaaaacatttttaatgtatatatc
agtagtgatatatatttatattgtcactgcattgataatgaatacaaagatatattaata
ttaaataaatctattcacttattgaacaaaatggaagtgagggagaaacttactcatata
gcattaaaaaaaacacataaaatgtcatttaaaattcttcaaggtatgttactgggctta
caatttatagaacaagagtccctcaaaaattatgttgatggagattatttcatagacatc
cctaattatacttttttggaaaatcatgaacagttgaataatggtatcaagaaggctatg
ataagttcattattgaacctgccaaaattgtttgatggtttaagctttcacattgaagat
cataacatagccgtggatgtgtatcatctaaaagtagataaagaatacttattaagacta
atagaagctggtggtggacagattttacttagggcaccagcacttagaacttgtgaaatc
gagaatattcacccattttatgctccattgcattcaaagacttactggtgttgtaattat
ataatctatcctgagaataaggctccaaaactactttacaacatgaaggagctacaacat
aaaacatctcgttggttaattgattgtatagccagatttgaaatatgtgactaa
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