Rhynchophorus ferrugineus (red palm weevil): 143196723
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Entry
143196723 CDS
T11283
Name
(RefSeq) polyadenylate-binding protein 1-like
KO
K13126
polyadenylate-binding protein
Organism
rfg Rhynchophorus ferrugineus (red palm weevil)
Pathway
rfg03015
mRNA surveillance pathway
rfg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rfg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
143196723
09123 Folding, sorting and degradation
03018 RNA degradation
143196723
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rfg03019
]
143196723
03041 Spliceosome [BR:
rfg03041
]
143196723
Messenger RNA biogenesis [BR:
rfg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
143196723
mRNA cycle factors
Stress granule specific factors
143196723
Spliceosome [BR:
rfg03041
]
Complex C
Other components
Complex C specific factors
143196723
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RBD_DEAH11
RRM_5
RRM_7
RRM_10
RRM_occluded
PABC_AtC3H46
Motif
Other DBs
NCBI-GeneID:
143196723
NCBI-ProteinID:
XP_076260797
LinkDB
All DBs
Position
Unknown
AA seq
577 aa
AA seq
DB search
MNNIPPQGVMFPMGSLYVGDLHPDVTEAMLYEKFSTAGQVLSLRICRDSRTKQSLGYGYV
NFNSPQDAERALDTMNFDPLKGKPIRIMWCQRDPSLRKSGIGNVFIKNLDKNIDNKAMYD
TFSAFGNILSCKVALDEDGYSKGYGFVHFENEEIANKAIEKVNGMLLNDKKVYVGKFIPR
IEREKSLGEKAKQFTNIYVKNFGSYMSDDKFRDLFSRFGSVTSSLVVRHLDGTSKGFGFV
AYEDPKSAEKAVQEMNGKEFEGRTLYVGRAQKKAERLNELRKKYEQQRMERFNKFQGVNV
YVKNLDDSFNDDKLRQEFCCFGTISSAKVMTENGRSRGFGFVCFSAPEEATKAIQEMNGK
MVGSKPLYVALAQRKEARKAFLTSQYMARAQAVRQQGLQYAGSPPFLLPAVAQAPRIFGP
APALRAAPRWPALQALPRPNGSAFGLPLLNAAPFRSPVRPSSVRPHARPITGASGPTARP
NSKYTTRHGPETPLVDGRLSHAAPQEQKQLLGEQLFRIVEKLHPELAGKITGMLLEIDNS
ELLHMIKNQESLRAKVEEAIAVLEAHKANKKGVVVQD
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatattccaccacagggagtaatgtttccaatggggtctctctatgtaggcgat
ttacatccagacgttacggaagctatgctatatgaaaaattttctaccgctgggcaagta
ttatccctcagaatttgtcgtgattctcgtaccaaacaatctctgggatatgggtatgtt
aatttcaatagtcctcaagatgccgaacgtgccttagacacaatgaatttcgatccgctc
aaaggtaaacctattagaatcatgtggtgtcaaagagacccatcacttagaaaatctgga
atagggaacgttttcattaaaaacctagataaaaacatcgataacaaggcaatgtacgac
accttttcggcatttggtaacatattaagttgtaaagttgcgctagacgaagacggatac
tccaagggttacggtttcgttcatttcgaaaatgaagagatagcgaacaaggccattgaa
aaagttaatggtatgctattgaacgacaagaaagtgtacgtcggcaaatttatacccagg
atcgagcgagaaaaatcgctaggcgaaaaagctaaacaattcactaacatttatgtaaag
aattttggttcttacatgtccgatgataaatttcgtgatttattctcgagattcggttca
gtaacaagtagtttggtagtaagacacctggatggaacgagtaaaggctttggtttcgtg
gcttatgaggatcctaaatccgcggaaaaagcggtccaggagatgaacggtaaagaattt
gaaggtcgcactttgtacgtgggtagagctcagaagaaagccgaaagactgaacgagttg
cgcaaaaaatacgaacaacagagaatggagaggtttaacaagtttcaaggggtaaacgta
tacgtcaaaaatctagacgatagctttaacgatgataagctgcgacaggagttttgctgt
ttcgggaccatcagctcggccaaagtaatgacggaaaatgggcgatccaggggatttgga
tttgtctgtttctcagctccagaggaggccaccaaggctatacaggagatgaatgggaaa
atggttggttctaaaccgttgtatgtcgcattagctcagcgcaaagaagctagaaaagct
ttcctcactagccaatacatggccagggctcaggcagtgaggcaacagggtctgcaatac
gccggtagtccgccgttccttttaccagcagttgctcaagctcctcgcatatttggtcct
gcaccagctttgagagcagcaccacgctggcccgcattacaagctttgccgcgccccaat
ggttcagcttttgggctacctctcctaaatgccgcgccctttagatctcctgttagacca
tcatctgtcagaccgcacgctagacccataacaggcgcctctggtcccactgcccggccc
aactcaaaatataccacccgtcatggcccagaaaccccattggtggacggtcgactctct
catgctgcacctcaggagcaaaaacaactgctaggggaacagttgtttagaatagtagaa
aagcttcatccagagttagctggtaagattaccggaatgttgctggaaattgacaattct
gagttgctgcacatgataaaaaatcaggaatctctaagggcaaaggtggaagaagcaatt
gctgttctagaagctcacaaagcaaacaagaaaggcgtcgtcgtgcaagattga
DBGET
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