Rhynchophorus ferrugineus (red palm weevil): 143196867
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Entry
143196867 CDS
T11283
Symbol
trh
Name
(RefSeq) PAS domain-containing protein trachealess isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
rfg Rhynchophorus ferrugineus (red palm weevil)
Brite
KEGG Orthology (KO) [BR:
rfg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rfg03000
]
143196867 (trh)
Transcription factors [BR:
rfg03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
143196867 (trh)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS_11
PAS
PAS_9
HLH
PAS_4
Motif
Other DBs
NCBI-GeneID:
143196867
NCBI-ProteinID:
XP_076260891
LinkDB
All DBs
Position
Unknown
AA seq
883 aa
AA seq
DB search
MHSSASVSSCCGFELDHPGSFSTSPWAAVLGHHAAAAASIMQTGEPHGYGAAHHPAAPMD
LHMPQAFPYYRYRDDTLCWTDRKPTVDDVGNPSSVNARYLPYDEPILELRKEKSRDAARS
RRGKENFEFYELAKMLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDGPPPS
KTLKGRRSSLAMDIFEQHQGTHILQSLDGFALAVAADGRFLYISETVSIYLGLSQVEMTG
SSIFDYIHHQDHSEIAEQLGLGLSQGQNLASPGSGSEESNSTAGTNNPDGKVSTVMSLGT
NPPYKGLDRAFCIRMKSTLTKRGCHFKSSGYRVVLMLCRLRPQYVFAHSRKSQQPPLLGM
VALAIALPPPSVHEIRLETDMFVTRINFDFKIAHCEPKVMELLDYSPEELTGRNLYALCH
GEDANKLRKCHIDLINKGQVLTHYYRIMNKNGGYTWIQTCATVVCNSKNADEQNIICVNY
VISGREYENLIMDCCQMEDNSHMVKREEASSNDPENGSPDADRGDDRNSGGPPNPPSDPS
QDMEDATGHGADPGTITKDTSDLRTRRLDPANSVTQLQGTTPQVDQRKTATPVRRAAKRK
NTSSDENDEEESANHNRNAVMSPASSCHSTTGTHPIVSSVEPTGSSPKKLDDGASTGGTS
VKDLENAMSKHLPACKSPTHQPTDFSTDALLKQQQRTTIQWIGAHQQLQQQGPLPASALL
RQLYANRESVIRANVHGITSAGSRSSSTSGYYPTDSQVGVGPLPTPPGSEGSSSYSEHQF
LLSQHQNYPTGYSMDYHSAMTPPSSVSPRDKHQQLHSGVAFDSPVPYQDVLRQYPDSPLP
LKPQVYSYVDQPQFYHHGTTGAGFHLYHPSKSTGAPSNWYSPS
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgcactctagtgcttcagtgagttcttgttgcggcttcgagctggatcatccgggcagc
ttcagcacgtcgccctgggcggcggtgctcggccatcacgcggcggctgccgcctctatc
atgcaaaccggcgaaccccatggttacggcgctgctcatcatccagctgcccccatggat
ctccacatgcctcaggcttttccttattacagatatcgtgatgatactctgtgttggaca
gatcgaaaaccaactgttgacgacgttggtaatccatcgtctgtgaatgcacgataccta
ccctacgatgaacccatcttggaactaaggaaggagaaaagcagggatgctgcccgttct
cggagaggaaaagaaaattttgagttctatgaactcgccaagatgttgcctttgccagca
gccataacctcacaattagacaaagctagtattataagactaacgatctcatatcttaag
ttaagggacttttctggacatggtgatccgccatggagccgggatggaccacctccttcc
aaaacgttgaaaggaaggagatcgtccttagctatggatatattcgaacaacatcaggga
actcacattttacagtccttggatggttttgctctagccgtagcagctgatggtagattt
ttatatatctcagagactgtttctatatatttaggactttcacaggtcgaaatgacgggt
agtagtatattcgattacatacaccaccaagaccattccgagatagccgaacaactaggt
ttaggtttatcgcaaggacaaaatctggcatctcctggcagtggttcggaagagagcaac
tcaacggcagggaccaacaaccctgacggtaaggtatccacggtaatgtcattagggaca
aatccaccatacaagggcttagacagggcattctgtattcgaatgaaatcaacattaaca
aaacgaggttgccattttaagtcatcagggtatagggttgtattaatgttgtgtagacta
aggcctcagtatgtcttcgcgcattctcgcaaatctcaacagccaccacttttgggtatg
gtggcgttggcaatagctttacctcctcctagcgttcacgaaattcgattggagaccgat
atgttcgtaactagaattaatttcgactttaagatagcccactgtgaacctaaagtaatg
gagctgttggactactcccctgaagaactgaccggaaggaatttgtacgctttgtgccat
ggtgaagatgccaataagcttaggaaatgtcatatagatttgattaacaaaggccaagta
ctgacgcactattatagaataatgaataaaaacggaggttatacgtggattcaaacatgt
gctactgtagtctgtaattctaagaatgccgatgaacaaaatatcatttgtgtaaattat
gttataagtggacgcgaatacgagaacttaatcatggattgttgccaaatggaagataac
tctcacatggtgaagcgagaggaagcgagcagtaatgacccagagaatggatcccctgat
gctgatcgaggagatgatagaaatagtggaggtccgccgaatccaccatcagatccctcg
caggatatggaggacgcgacaggacatggtgccgatccaggtaccatcaccaaagatacc
agtgacttaagaactcgaagattggaccccgcgaactcagtcacacagttgcaaggtacc
acgcctcaggttgaccaaagaaaaactgccactccggttagacgggccgcaaaaaggaaa
aacacttcatcggacgagaatgacgaggaggaaagtgccaatcataataggaatgccgtt
atgagccctgctagttcatgccattcaactactggcacgcatcctattgtttccagtgtt
gaacctacaggaagtagcccgaaaaagcttgatgatggagcaagtacaggaggaacatca
gttaaagatttagaaaacgctatgtcgaaacatcttccagcctgcaagtctccaactcat
cagcctacagatttcagtacggatgctttgttaaaacaacaacaaagaactaccatacag
tggattggtgctcatcaacaactccaacaacagggacctttacctgcttcagcgttgtta
agacaactttatgccaatcgggaaagtgtcattagagctaatgtacatggtataactagc
gctggtagtcgatccagtagcacttcaggatattacccgacagattcacaagttggtgta
ggtccattaccaacacctccaggtagtgaagggtcatcctcttacagtgaacaccagttc
cttttatcacaacaccaaaactatcctactggttactcaatggattaccattccgccatg
actcctccgtccagtgtctctccaagggataagcatcagcagctgcactcaggagttgcc
ttcgattccccagtaccatatcaagatgtcttaagacagtatccagatagccccttgcct
ttgaagccccaggtctattcctatgttgatcagccccaattttatcaccacggtactacc
ggcgcaggctttcacttgtatcatccgagtaaaagtacgggagctccttctaattggtac
tccccatcatag
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