Rhynchophorus ferrugineus (red palm weevil): 143198515
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Entry
143198515 CDS
T11283
Symbol
Sf3b3
Name
(RefSeq) splicing factor 3b subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
rfg Rhynchophorus ferrugineus (red palm weevil)
Pathway
rfg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rfg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
143198515 (Sf3b3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rfg03021
]
143198515 (Sf3b3)
03041 Spliceosome [BR:
rfg03041
]
143198515 (Sf3b3)
03036 Chromosome and associated proteins [BR:
rfg03036
]
143198515 (Sf3b3)
Transcription machinery [BR:
rfg03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
143198515 (Sf3b3)
Spliceosome [BR:
rfg03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
143198515 (Sf3b3)
Complex B
143198515 (Sf3b3)
Complex C
U2 SnRNP specific factors
143198515 (Sf3b3)
Chromosome and associated proteins [BR:
rfg03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
143198515 (Sf3b3)
TFTC complex
143198515 (Sf3b3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
143198515
NCBI-ProteinID:
XP_076263900
LinkDB
All DBs
Position
Unknown
AA seq
1216 aa
AA seq
DB search
MHLYNLTLQRATAITHAIHGNFSGTKVQEIVIARGKSIELLRPDPNTGKVHTILTVEIFG
IVRSMMPFRLTEDTKDYIIVGSDSGRIVALAYNPQKNIFVKEHRETFGKSGCRRIVPGQY
LATDPRGRALLLGAIEKQKLAYILNRYEHTRLTISSPLEAPKSNTLVYHMVGVDVGYYNP
MFACLEIDYEEADSDPTGEAAQKTQQTLTFYELDLSLNYVVRKYSEPLEEHANFLITVPG
GDDGPSGVLVCSENYLTYKNLGDQHDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDGDMVNEIKLKYFDTVPVATAMCVLKTGFLFVACEFGNHYLYQ
IAHLGDDDDELEFSSAMPLEEGDTFFFAPRPLRNLVLVDEVESLSPILSCKVADLAGEDT
PQLYMLCGRGPRSSLRVLRHGLEVSEMAVSELPSNPNAVWTVKNRSDDEFDAYIIVSFMN
ATLVLSIGETVEEVTDSGFQGTTPTLACATLANDALVQIYPEGMRHIGPDKRVNQWKDGK
KTIVKCAVNQRQVVLALTGGELVFFELDPTSQLHEYKERKRMNSDVLCMALGSVASGEQR
SSFLAVGLADSTVRIISLDPADSLAHRAMQPLPVCAESLCVVEMGAGSDSEGNSVQGGST
LYLNIGLQNGALLRTVLDPITGDLTDTRTRYLGSRPVKLFKIRMQNSEAVLAVSSRSWLS
YYYQSRFYLTPLSYESLEYASGFSSEQCPEGIVAISTNTLRILALEKLGAVFNQISFPLE
YTPRKFIIHPDTNRLFVLETEHNAYTEETKKQRRLQMAEEMKEAAGEDEQELAKEMAEAF
LNEDLPENVFSAPKAGHGMWASTLKIMDPVRGNVHKCIRLEQNEAAMSLALIKFHGQPEH
QWFLIVGVAKDFQLNPRICTQGFLDTYKVDVMCRELELVHRTPVDEVPMALCAYNGRLLA
GIGRMLRLYDMGKKKLLRKCENKHIPNAIVNIQAMGKRIFVSDIQESVFMVRYKRAENQL
IIFADDTHPRWITCTTVLDYDSIATADKFGNIAILRLPPNVSDDVEEDPTGHKALWDRGL
LNGASQKAETIATFHVGETVTSLQKATLIPGGSESLIYTTCSGTVGVLVPFTSHEDHDFF
QHLEMHMRSTNEPLCCRDHLAFRSYYFPVKNVIDGDLCEQYNSMEPAKQKSIAGDLDRSP
AEVSKKLEDIRTRYAF
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgcatctatacaatttgactttacaaagggctacggccattactcatgccatacatggc
aatttttctggaacaaaagtacaagaaatcgtcattgcacgtggcaaaagtatcgaatta
ctgcgccccgatccaaacaccgggaaagttcacacaatcctaacagtcgaaatatttggc
attgttaggtccatgatgccctttagattaaccgaggacaccaaagattatataattgta
ggatcagacagcgggagaatagtcgcactagcgtacaatccccagaaaaatattttcgtt
aaggaacatagagagacgtttggtaaaagcggctgtcgtcgtatagtacctggtcaatat
ttagccacagatcctaggggtagagctttgctgctgggggccatcgaaaagcagaaactt
gcctatatcttgaacagatatgagcacactcgtttgactatttcttctccattggaggcc
cccaagagcaacaccttggtgtatcacatggttggtgttgatgtaggttattataacccg
atgtttgcgtgtcttgaaatcgattatgaagaagcagactctgatcctacgggcgaggca
gcccagaaaactcaacagacattaacattctacgaactagatttaagtttgaattatgta
gtgagaaaatattcagaaccgcttgaagagcacgcgaattttctcataaccgttccggga
ggcgacgacggtccctcgggagtcttggtgtgctccgagaattatttgacgtacaagaac
ttgggtgaccagcatgatattcgttgtcccataccacggcgtcgcaatgatttagatgat
cccgaacggggcatgatcttcgtgtgttctgcgactcacaaaaccaagtcgatgttcttt
tttttggcccaaaccgagcaaggagacatctttaaaatcactctggaaacggatggggac
atggtcaatgaaattaaactgaaatatttcgataccgttcccgtagcaactgctatgtgc
gttttgaagactggatttttgtttgtggcctgtgaattcggtaatcattacctttatcag
attgcccatttgggcgatgacgacgatgaactggaatttagttccgccatgccactggaa
gagggcgacacatttttctttgcacctagaccattgcgtaaccttgttttggttgatgaa
gttgaaagtctttctccgattctttcctgtaaagtcgccgatttagctggtgaagatacc
ccacaactttacatgttatgcgggcgtggtccgagatcgtcgttacgagtgttgagacat
ggtttggaggtatcagagatggctgtgtccgaactaccaagtaatccgaatgccgtttgg
acagttaaaaatagaagtgatgatgagtttgatgcttatatcattgtgtcgtttatgaac
gcgaccttggtactgtcgatcggcgaaactgttgaggaggttaccgacagtggtttccag
ggtaccacgcctactttggcgtgcgctactctagcgaacgatgcgttagttcagatttac
ccggagggtatgcgtcatatcggccccgataagagggtgaatcagtggaaggatggcaag
aaaactatcgtgaagtgtgctgttaaccagcgccaagttgtactggctttaacgggcggt
gaattggtgttcttcgagttggatcctactagtcagctgcacgagtacaaggaacgtaag
agaatgaattccgatgttctgtgcatggctctgggaagtgtcgcttctggcgaacagcgc
tcgtcgtttttagccgtcggactggccgatagtaccgtccggattatatctctggatccg
gccgacagtttagcccacagggccatgcaaccgctgccggtgtgcgcggagtctttgtgc
gttgtcgaaatgggcgccggttccgattccgaaggtaacagcgtccaaggaggcagcaca
ctctacctgaacatagggttgcagaacggtgccttactcaggacggttctggacccgatc
accggcgatttaacagacacgagaacaagatacttgggatcaagacccgtaaaattattt
aagattcgcatgcagaattccgaagcagttttggccgtgagcagtcgctcgtggttgagc
tactactatcaaagtcgtttttaccttacaccactctcgtacgaaagtttagagtacgcc
tcaggattcagttctgagcaatgccccgaaggaatagtcgctatctcgacgaataccttg
aggatcttggctttggaaaaattaggcgctgtgtttaatcagatatcattcccactcgag
tacactccaagaaaatttattattcatccggatacaaatcgtctgttcgttctggagact
gagcacaacgcttatacggaggagacaaagaaacagaggcgcttacagatggctgaagaa
atgaaggaagctgccggcgaggacgagcaggaattagcgaaggaaatggcggaggccttc
ctgaacgaagacctgccggaaaatgtgttttcagcgccgaaggccggccacggaatgtgg
gcttccactttaaagataatggatcccgtccgtgggaatgtacacaaatgcatcaggttg
gaacaaaacgaagccgcgatgtcgctggccttgattaagttccacggacagcccgaacat
cagtggttcctgatagtgggggtcgccaaagatttccaactgaatcctcgcatctgcacc
caaggatttctggatacttacaaggtagatgtgatgtgcagggaattggaattagttcat
agaacgccagttgatgaagtacccatggcattgtgtgcttacaatggtaggctcttggca
ggcatcggcaggatgttgagattgtatgacatggggaagaagaaattattaagaaaatgc
gaaaacaaacacattccaaacgccatcgtaaatatccaagccatgggcaagaggatattc
gtatccgatatccaggagtcagtttttatggtgagatataaaagggcggagaaccagctg
attattttcgcggacgatactcacccgcgctggatcacctgtaccacggtgctggattat
gattcgatagcgacggccgataagttcggcaacatcgcgatcttgagactgccgccgaat
gttagcgatgacgtggaagaggacccgaccggtcataaagccctctgggacagagggttg
ttgaatggggcttcacaaaaagccgaaacaatagcgaccttccatgttggcgagacagtg
acttccttacagaaagccacgttaatcccaggaggcagtgaatccttgatatacactacg
tgctcggggacggtcggagtgctagttccgttcacctcgcacgaagatcacgatttcttc
cagcatttggagatgcacatgagaagcacaaatgaaccgttatgttgccgggatcatctg
gcgttcagaagttattatttccccgtgaagaacgtcatagacggcgacttgtgcgaacaa
tacaactcgatggaaccggcgaaacagaagagcatcgcgggagatctggaccgcagccct
gcggaagtctcaaagaagttggaagatatccgaacgcgttacgcgttttga
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integrated database retrieval system
