Rhynchophorus ferrugineus (red palm weevil): 143199146
Help
Entry
143199146 CDS
T11283
Symbol
Upf2
Name
(RefSeq) UPF2 regulator of nonsense mediated mRNA decay
KO
K14327
regulator of nonsense transcripts 2
Organism
rfg Rhynchophorus ferrugineus (red palm weevil)
Pathway
rfg03013
Nucleocytoplasmic transport
rfg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rfg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
143199146 (Upf2)
03015 mRNA surveillance pathway
143199146 (Upf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rfg03019
]
143199146 (Upf2)
Messenger RNA biogenesis [BR:
rfg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
143199146 (Upf2)
mRNA cycle factors
P-body specific factors
143199146 (Upf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
143199146
NCBI-ProteinID:
XP_076265048
LinkDB
All DBs
Position
Unknown
AA seq
1125 aa
AA seq
DB search
MTVSEGTEQESEKTDDSVMSEEELEQLKLYIKEVEERLKSKQELRGLNQDAAHTRPGDSH
FSKLDSSLKKNTAFVKKIKNFSSAQVDAYLKDMAGLNLSKYISEIASAIVDSKLKMTDVP
AALRLCSMLHQTYAEFSQHLFENWQKALAIKMGEKIQNPSKLRVDLRFYAELLQSGVFSN
KNAFTLLGTVLTTLINMDKEEHINVSIVLSFCKHCGDDYAGLLPRKMRELSAKYNIPVPK
SSFLPSEKQQNVRSYLKEYFLSLSKHLVKDHQELQNFAKQNMKILHTKGELSQERKEKQE
SLQSSYDKLLANTQNFAEILDEDMPILKVEAMPKTEENMIVTGSGADFEEGSSNLENIWV
DVETQKFYCDLPELTAFLPTSYLKNQQAAPTETVTEEVLDSELPAEETDDNSKSEETPVP
EDDNDDPAATNASNKIILEAYLNNLPNCVNREMIDNSAIDFLVTLNNKHNRRKLVRAIFS
VNRTRLDLLPFYARFVAILYPAVPEVGNELCQMLRQDFKYHVKKKDQINIESKIKVVRFI
GELVKFKLYSKIEALYCLKVLLHDFSHHHIEMACNLLEVCGRYLYCSPESRQRTKVYLEQ
MMRKKTVMTLDSRYVTQIENAYYFVNPPEVVSVAVKERPVMHQFIRKLLYQDLQKNNTDK
IMKLMRKIDWTNEETANYAIKCLTGAHNMKYFNIRCLANLLAGLVGYQEEIGTKVVDGVL
EDIRLGMEVNLPKYNQRRVAQIKYLGELYNYRMVESADVFKVLYSLISFGVSMDPAEPSP
LDPPGHLFRIRLACVLLETCGTYFSSGTSKRKLDYYLIFLQMYYWYKKELWKETFPPTLE
HIFKEALSNLRPKLKLCKSYEEAQAEVNNIRSTLGIENIIMENKSKDQEDGLDTINETDN
EDIVDDEVSEGATGPITDDTATEDETIDHTQGSDVEGDIETSEAEAEQVSESLAIPKGPK
KIDCPEDEDFLSALDKMVSENIQERMRDPVKAGNMDISVPMVMKNSSKKSYEQLQEPDEN
GKQKMGFVLMVRKGNKQQYKQFEADVDSELVQNLKDQELAQREEKERVKRLTLNITERFE
EEDYQESISQQNRPVTQNLNRERKKYQHPKGAPDADLIFGPKKVR
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgactgtttctgaaggtaccgaacaagaaagcgagaaaaccgatgactctgtaatgagt
gaagaagaattagaacaattaaaattatacataaaggaagttgaagaaagattaaaatcc
aaacaagaattaagaggtttaaatcaggatgctgctcatactcggccaggggattctcat
tttagtaaacttgattctagtcttaagaaaaatacggcatttgttaaaaaaatcaaaaat
ttttcatctgctcaagtggatgcatatttaaaggatatggctggtttaaatttatctaaa
tatatttcagaaatagccagtgcaatagtagattcaaaattaaaaatgactgatgttcct
gctgcattaaggttgtgtagtatgttgcaccaaacttatgcagagttttcacagcattta
tttgaaaactggcaaaaagcactggctataaagatgggagagaagatacagaaccctagt
aaactcagagtagatttacgtttttatgctgagttgcttcaatcaggcgttttttcaaat
aaaaatgcttttactcttttgggtacagtattaacaacgctgataaatatggacaaagaa
gagcatattaacgtatcaatagtgttaagcttttgtaaacactgtggtgatgattatgct
ggcttattaccaagaaaaatgagagaattatcggcaaaatataatatccctgttccaaag
agtagttttctgccatctgaaaaacaacaaaatgttagaagttatctgaaagaatatttt
ttatcattgagcaaacatcttgttaaagaccatcaagaactacaaaattttgctaaacag
aatatgaaaatacttcatactaaaggggaattgagccaggaaagaaaggaaaagcaagaa
tcattgcaatccagttatgataaattgttagcaaatacgcagaactttgctgaaatatta
gatgaagatatgccaattttgaaagttgaagctatgccaaaaacagaggagaatatgatt
gttactggatctggggcagattttgaggagggttcatcaaatttggaaaatatttgggtt
gatgtagaaacccagaaattctattgtgacttaccagagttaaccgctttccttccgact
tcatatttaaaaaatcaacaagcagctccaactgaaactgtaactgaggaggttttagat
tctgagttacctgctgaagaaactgatgataatagtaaatctgaagaaactccggttcct
gaggatgataatgatgacccagctgccacaaatgctagcaataaaatcatattagaggct
tacttaaataacttaccaaactgtgttaatagagagatgattgataattcagcaattgat
tttcttgtaactttaaataacaaacataacagaagaaaattggtcagagcaatattttca
gtgaatagaacgagattggatttattaccattctatgctcgttttgtggcaatactatat
cccgctgttcctgaagtagggaatgagctgtgtcaaatgttgcgacaagatttcaagtat
cacgttaagaaaaaggaccaaataaacattgagtccaaaattaaagttgttaggtttata
ggagaattggtcaaatttaaattatattcaaaaattgaagctctttattgtttgaaagtg
ctgctacatgacttttcccaccatcacatagaaatggcctgtaatcttcttgaagtgtgt
ggaagatatttatactgtagcccagaatcacggcaaagaaccaaggtctatttagaacaa
atgatgagaaagaaaacagtgatgacgttagattccagatatgtaacgcaaattgagaat
gcttattactttgttaatccaccagaagttgttagtgtagcagtaaaagaaagacctgtt
atgcaccagttcatcagaaagctcctttatcaagatttacaaaaaaacaacacagacaaa
ataatgaagttaatgcgaaaaatagactggactaatgaagaaactgccaattatgccatt
aagtgtttaacaggagctcataatatgaaatattttaatatacggtgtttggcaaattta
ctagctggtttagttgggtaccaggaagaaattggaaccaaagtagtagatggtgttttg
gaagatatcagactgggaatggaagtcaatttaccaaaatataatcaacgaagagttgca
cagataaaatatcttggggaactgtataactatagaatggtagaaagtgcagatgtattt
aaagtgctatactcattaatatctttcggagtatcgatggaccctgccgaaccttcgcca
ttggaccctccaggacatcttttcagaataagactagcatgtgtattattggaaacttgt
ggtacctatttcagcagtggcaccagtaagagaaaattggattattacttaatattcctg
caaatgtattactggtataaaaaagagctctggaaggaaacctttccgccaacattagaa
cacattttcaaggaagcactctctaacttacgacctaaattaaaattatgcaaaagttat
gaggaagcccaggctgaggtcaataatatacgttcaacattgggtatagaaaatattata
atggaaaataagtctaaggaccaggaagatgggttagatactataaatgaaaccgacaac
gaggatatagtagacgatgaggtatcagagggcgctaccggtccaatcacagatgataca
gctacagaagacgaaactattgatcatacacaaggatcggacgtagaaggggacattgaa
actagcgaagctgaagcggaacaagtgtctgagtccttagccataccaaaaggtccaaaa
aaaatcgattgtcccgaagatgaagactttttaagcgctcttgataaaatggtatccgag
aacatccaagagcgtatgcgagatccggttaaagccggcaacatggacatttctgtgccg
atggtgatgaaaaacagctccaaaaagagctacgaacagttacaagaaccggacgaaaac
gggaaacaaaaaatgggtttcgtattgatggttcgcaagggaaacaagcaacaatacaaa
caattcgaagccgatgtcgattccgaactggttcagaacctgaaagaccaagagctggcg
caaagagaggaaaaggaacgggtaaaacgacttacgctcaacatcacggaacgtttcgag
gaggaagactatcaggaatcgatttcccagcaaaatagacccgtaactcaaaatttgaat
cgcgaaagaaagaaatatcaacacccaaaaggcgctcccgacgccgacttgatattcgga
ccgaagaaagtgcgatag
DBGET
integrated database retrieval system
