Rhynchophorus ferrugineus (red palm weevil): 143199505
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Entry
143199505 CDS
T11283
Symbol
Spt6
Name
(RefSeq) transcription elongation factor Spt6
KO
K11292
transcription elongation factor SPT6
Organism
rfg Rhynchophorus ferrugineus (red palm weevil)
Brite
KEGG Orthology (KO) [BR:
rfg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rfg03021
]
143199505 (Spt6)
03036 Chromosome and associated proteins [BR:
rfg03036
]
143199505 (Spt6)
Transcription machinery [BR:
rfg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
143199505 (Spt6)
Chromosome and associated proteins [BR:
rfg03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
143199505 (Spt6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
Tex_central_region
SH2
HHH_9
Tex_YqgF
Spt6_S1
S1
HHH_3
Tex_N
Motif
Other DBs
NCBI-GeneID:
143199505
NCBI-ProteinID:
XP_076265505
LinkDB
All DBs
Position
Unknown
AA seq
1776 aa
AA seq
DB search
MADFIDSEAEESSEEEELEPHERKKLKKVKAMDDSSEEEEDDDDKIREELHDLIDDNPIE
ESDGEDSDASGGEKRKKSDDEDLDDRLEDDDYDLLEENLGMKVERRKFKRLRRIQDEESE
GEDENDAEQEREHIAMDLFSEDDDERRSERSHRPAADTEQFGEEEEEGEYSDTDDFIVDD
DGKPIARKKKKPIFSDAALQEAQETFGVDFDYDEFAKYDDEYDEEDEDEEDEYEEDDEGE
RRRRQKKAGKKRPTKKSIFEVYEPSELKRGFFTDLDNEIRNTDIPERMQLRDVPLTAVPD
DSTELDDEAEWIYKQAFCKSTVSSTDAHLTAEAREKQKKGPQTIGKIRKALDFMRNQQLE
VPFIAFYRKEYVQPELNINDLWKVYKYDAKWCQLKSRKENLLALFEKMRSYQIDQLMKNP
DAPIPDNVRVMKDSDIERLKNVQTAEELNDVHNHFILYYAQDLPAMHAAWRLKERERRKS
EKREARLKALAEAEDGADIPDEIPDEEEEDEPEQETIKYANRSGSYALCSKAGLDTMAKK
FGLTPQHFAENLRDNYQRHDVDQEPTEPVEVAKEFISPKFQTIEEILQATKYMVALQIAR
EPLVRKCVREAFYEKAKLSVIPTKKGQKVIDETHSCFSMKYLKNKPVRDLTGDQFLKLSL
AEEEQLLTIKISDSIEGHTSNSYVDEVKQLYIRDEFSKTVQEWNKLRGECVERALTRCIF
PDLQSELKRVLLAEAKEFVLKACCRKLYNWIKIAPYQVVFPEEDEDEWDVSKGIRTMGLA
YVPDYSQSAFACICAPDGEITDHLRLPHILKRKNSYRQEEKLMKEADLTALRNFIYTKKP
HVIAIGGESKEALMIADDIRGIISDLIESEQFPAIKVEIIDNELAKVYASSNKGTADFRD
YPELLRQAISISRKMQDPLIEYSQLCNSDEEILSLRFHPLQEQIGKEELLEALCLEFVNR
TNEVGVDVNLAVQQTHKSHLIQFICGLGPRKGQALLKVLKQTNQRLENRTQLVTACHMGP
KVFINCSGFIKIDTNSLGDSTEAYVEILDGSRVHPETYEWARKMAVDALEYDDDEGANPA
GALEEILETPERLKDLDLDAFAEELERQGFGNKSITLYDIRAELNSRYKDLRTPYKSANP
EELFDMLTKESPETFYIGKLVQASVVGIARRKPQGEQLDSANPVRNDETGLWQCPFCLKN
DFPELSDVWNHFDAGSCPGQATGVKLRLDNGISGYIYIKNLSDKPVSNPEERVGIGQLIH
CRIMKIDVERFSVDCTSKSSDLIDKNHEWRPQRDPYYDQEHEEKDNRSEAEKKKEKQKQT
YIKRVIVHPAFHNISYAEAEKCMANMDQGEVIVRPSSKGVDHLTITWKVADNIYQHIDVK
EEGKSNAFSLGKSLWIANEEFEDLDEIIARYVNPMASYARDLLYFRYYKDTEGGLKDKAE
EYLKDEKKKNPSKIHYVISAAKNFPGKFLLSYLPRNKVRHEYVSITPEGFRFRQQMFDSV
TSLFKWFKEHFRDPIPGGTPSTPRMGSGRTPYQGTATTPFNGMNSEAIQRVAQNLPSHML
QSLSAVANQTPHYPHTPGGAYGANYINTPYTPSGQTPFMTPYQTPHHQQTPRYGQATPSA
VPTGMSSGPFLHPGAVTPSHRTPSYRNIPTQSPINSSPVPSPASQSSYSSRRNASRAPGY
GSSGGYGNSEQMDWQKAAEAWAARSRGTPRSDGRNTPRGSTGQRTPRYDDIRADLERTKM
KNVGKSPRSLRSTPRTNMSPHSMSLGDATPLYDESI
NT seq
5331 nt
NT seq
+upstream
nt +downstream
nt
atggctgattttatcgattctgaagcagaagaaagtagcgaggaagaggaattggagccc
catgaaagaaagaaactgaaaaaagtcaaagctatggatgatagttctgaggaagaagag
gatgatgatgataaaatacgtgaagaacttcatgatttgatagatgataatcctattgaa
gaaagtgatggtgaagattctgatgcatctggaggagaaaagcgaaagaaatctgatgat
gaagatcttgatgatagacttgaagatgatgattatgatttacttgaagaaaatttaggc
atgaaagtagaaagaaggaaatttaaaaggttacgaaggattcaagatgaagaaagtgaa
ggagaagatgaaaatgatgctgagcaagaaagagagcatattgcaatggatttgttttct
gaagatgatgatgaaagaagatcggaacgtagtcaccgtccagcagctgatacggaacaa
tttggtgaagaagaagaagaaggagaatattcagatactgatgattttattgttgacgac
gatggcaaaccaattgctagaaaaaaaaagaagcctatattttcagatgctgccttacaa
gaagctcaagaaacttttggtgttgattttgactatgatgaatttgctaaatatgatgat
gaatatgatgaagaggatgaagatgaggaagatgaatatgaagaagatgatgaaggagaa
agaagacgtcgtcagaaaaaagctggtaaaaagcgtccaacaaagaaatccatatttgag
gtatatgaaccttctgaacttaaaagaggcttctttacggatttggataacgaaattcga
aatacggatatacctgaaagaatgcagttacgtgatgttcctttaacagcagtacctgat
gattcgacagagcttgatgatgaagctgaatggatttataaacaagccttttgtaaatca
actgtgtccagtacagatgctcatttgacagctgaagctagagaaaaacagaaaaaaggc
ccacagacaatcggaaaaattcgtaaagctctcgattttatgcgcaatcagcagctagaa
gtcccgtttattgctttttatcgaaaagaatatgttcaaccagaacttaatattaatgat
ttgtggaaggtatataaatatgacgcgaagtggtgtcaattaaaaagcagaaaagaaaac
ttattggctctctttgaaaagatgaggtcttatcaaattgaccagttaatgaaaaatcca
gatgcacccataccagataatgttagagttatgaaagattcagacatagaaaggttgaaa
aatgttcaaactgctgaagaactaaatgatgttcataatcattttatattatattatgct
caagatcttccagctatgcacgcagcttggcgacttaaggagagagaaaggagaaaaagt
gaaaagcgcgaagccagattaaaagctttggcagaagctgaagatggtgctgatattcca
gatgaaatacctgatgaagaagaagaagatgagccagagcaagaaacaattaaatatgca
aatcgatcaggatcatatgctttatgtagtaaagcaggcttggatacaatggctaaaaaa
tttggtttgacaccacaacattttgctgaaaatttacgagataattatcaaagacatgat
gttgatcaagaaccaacagagccagttgaagtggctaaagaatttatatcaccaaagttt
caaacaattgaggagattctacaggctacgaaatatatggtggcattacaaattgcccgc
gagcctttagtacgtaaatgcgttcgtgaagcattttatgaaaaggctaagttaagtgtg
attccaacaaaaaaaggacaaaaagttattgatgaaacccattcttgcttcagcatgaaa
tacttgaaaaataaaccagttagagatcttactggtgatcagtttttgaaattaagcttg
gctgaagaagaacagttacttacaattaaaataagcgattctattgaaggtcatacatca
aattcatatgtggatgaggtgaagcaattgtatattcgagatgaatttagcaaaactgta
caagaatggaataaactaagaggggagtgtgttgaacgtgcacttactagatgtatattt
cctgatttacaatctgaattaaaaagagttttattagcagaagctaaagaatttgtgtta
aaggcatgttgcagaaaattatataattggattaaaatagctccatatcaagttgttttt
cctgaagaagatgaggatgaatgggatgttagtaaaggtattagaactatgggcttagca
tacgttcccgactactcacaatccgcatttgcctgtatatgtgcccctgatggtgaaatc
actgatcatctacgtttgccccatatattaaaaaggaaaaacagttaccgacaggaggaa
aaacttatgaaagaagctgatctcactgcccttcgaaattttatttatactaaaaaaccc
catgttatcgctatcggtggagaatctaaagaggcattaatgatagctgatgatatacga
ggaattatcagcgatttaattgaatctgaacaattcccagcaattaaagtagaaattatt
gataatgagcttgctaaagtttatgccagttcaaataaaggaacagcagattttagagat
tatcctgaactcttgagacaagctatatcaatttctagaaaaatgcaagatcctttaata
gaatattctcaattatgtaacagtgatgaagaaatacttagtttgcgctttcatccgtta
caggagcaaattggaaaagaagaattattagaggcattatgcctagaatttgtaaataga
actaatgaagtaggtgttgatgttaatttagctgttcagcaaacacataagagtcacttg
attcaatttatttgtggtttggggccaaggaaaggccaagcattattaaaagtacttaaa
caaactaaccaaagactagaaaacagaacacaacttgttacagcttgtcacatgggaccc
aaagtgtttattaattgttctgggttcattaagattgataccaatagtttgggtgatagt
acagaagcatatgtagaaattttagatggttctcgagttcacccagaaacctatgaatgg
gcacgtaaaatggctgtagatgcactagagtatgatgatgacgaaggtgcaaatccggcg
ggagcccttgaagaaatattagaaacaccagagagactgaaagatctggatttagatgcg
tttgcagaggaattagaacgtcaaggatttggaaataagagtattacattatatgatatt
agagcagaactaaattctagatataaagatttgagaacgccatataaatcagcaaatcca
gaagagctgtttgatatgttaacaaaagaatctccagaaacattttatatagggaagctc
gttcaagcgtctgttgtaggaatagcaaggaggaaacctcaaggtgaacaacttgattct
gcaaatcctgtgcgtaatgatgaaacgggtctatggcaatgtccgttttgtttaaagaac
gattttcctgaattatctgatgtctggaatcattttgatgctggttcatgtcctggtcaa
gctactggagtcaaattaagattggataatggaatttctggatatatctatatcaagaac
ttaagtgacaagcctgtttcaaatccagaagaacgcgtggggattggtcagctgatacat
tgcaggattatgaaaatagatgtagaaaggttctcagttgactgtacatcaaaatctagt
gatttgattgataaaaaccatgaatggagacctcaaagagatccatattatgaccaagaa
catgaagaaaaggataataggagtgaagctgaaaagaagaaagagaagcagaagcagaca
tatataaagcgtgtaattgttcatccagctttccataatatatcatatgcagaagcagaa
aaatgtatggccaatatggatcaaggtgaagtgattgtaaggccatcaagtaaaggggtg
gatcatttaacaattacttggaaggttgctgataatatttatcagcatatagatgttaaa
gaagagggtaaatcaaatgcgttttcactaggtaaatctttatggattgcaaatgaagaa
tttgaagatctagatgaaattattgctagatatgttaatccaatggcatcatatgcaaga
gatcttttatattttagatattataaggatacagaaggtggtttgaaagataaagctgaa
gaatatctaaaagatgaaaaaaagaaaaacccttcaaaaattcattatgtcataagtgca
gctaagaatttcccagggaaatttttgctgtcatatttaccaagaaacaaagttagacat
gagtatgttagtattactcctgaaggatttagatttaggcagcaaatgtttgattctgtt
acttcattatttaaatggtttaaagaacactttagagatccaataccaggtggtacacca
agtactccaagaatgggttctggccgaacaccataccaaggaactgcaaccacaccattc
aatggaatgaattcagaagctatacagagggtcgctcagaatttgccttcccacatgtta
cagagcttatccgctgtagctaatcaaacacctcattacccacatacgcctggtggggct
tatggagcaaattatattaatacaccatacactcctagtggacaaactccatttatgacc
ccatatcaaacccctcatcaccaacagacaccaaggtatggccaagcaacaccatccgct
gtcccaactggaatgtcttcaggacctttccttcatccgggtgctgttacaccatctcat
agaactccgagttatagaaatataccaacacaatcaccaattaattctagcccagttcct
agtcctgcctcacaaagttcttattcaagtcgacgaaatgcatctagagctccagggtat
ggatctagtgggggatatggcaattcggaacaaatggactggcaaaaagctgccgaagct
tgggcggctcgaagtcgaggtacgcctaggagtgatggtcgtaatactcccagaggttct
acagggcaaagaactcctcgctacgatgatattcgagctgacttagagagaacaaaaatg
aaaaatgttggaaagagcccgagatctctccgatcgacgcctaggaccaacatgtcacca
cacagtatgtctttaggggatgcgacacctctgtatgacgaaagtatataa
DBGET
integrated database retrieval system
