Rhynchophorus ferrugineus (red palm weevil): 143199687
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Entry
143199687 CDS
T11283
Symbol
htt
Name
(RefSeq) huntingtin isoform X1
KO
K04533
huntingtin
Organism
rfg Rhynchophorus ferrugineus (red palm weevil)
Brite
KEGG Orthology (KO) [BR:
rfg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rfg03019
]
143199687 (htt)
04131 Membrane trafficking [BR:
rfg04131
]
143199687 (htt)
03029 Mitochondrial biogenesis [BR:
rfg03029
]
143199687 (htt)
Messenger RNA biogenesis [BR:
rfg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
143199687 (htt)
Membrane trafficking [BR:
rfg04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
143199687 (htt)
Mitochondrial biogenesis [BR:
rfg03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
143199687 (htt)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Htt_N-HEAT
Htt_C-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_EF3_N
Vac14_Fab1_bd
Motif
Other DBs
NCBI-GeneID:
143199687
NCBI-ProteinID:
XP_076265783
LinkDB
All DBs
Position
Unknown
AA seq
2804 aa
AA seq
DB search
MATQEKLQRSLEALKNLSSLPHSPDPIRKKEKIHHCHIVTEAFSNSTIKVSTKFQVLLNF
TIDTFLQLCDDPESDIRMTSDECLNRIIRTVSAEHIAKVLIILHKEISKNGSARSLRAAL
VRFSQLAHHIKPHKGKVYVINFFPSIIRITKRTEEPIHETLANCLPKIINVLGPFATDAD
IELLLKAFLNNINNSSPTVRRAASNCILSICINSRKPYIFVTYCVNILLGLIIPVDDTHD
NYVILGVLYSLKLLLPALIDSNINNDGFSYSKDIEIIQPLALSKFLQIYELCLFYIRNKD
HNIINASLETLNVLLSNITADLKNKLLSPSGVDKCRIHKSQSFNNIKSPSQLSIATNTTS
AEETLFSECDLTETIESDIGKWIGESKLSVINMPHGNAADEDIIEPVMTSNEDNIAASSC
ENNVRKEQNKFGIELRKIGNADTIDKLSNKSSEESITASESVDKLLDHDLDNQEVDIGKY
LDKNVSLSYCARLIIKSFLLCGVAGKCISDKTVRVSVKSSALCCLSSIFRLYPQVFFQYL
NKNGTNDSKSQLSKISHQKISDILLFSEHSDPQLRGNIRMIVSDLISAILLESNLDFDLW
IKNNINQRNIPKDGTCYHMTDFIAILSKGLQDENSNCLKQTLISLNPVLMLLAESKNCHD
ILSLLDTLPYLANNPYWLVKVSLCELVSKLSYVTLFHITENSIFQSKVLYNILFLFLKDS
DQRIRSAASASLTEIIENLYFEEYHPMESHVTTKAILINNKLGFKNSTGEMNLQRKQFIE
SMPFPYLKIGGSISKSIDYSLSKIVMHLYSTVLSTQSKYLIYGGIEALSLLSNKYPCTIY
RKSWCDSKHFKDNDVEVSMTYSSEDLFTLCVDYLTNSIYVYDIAFMNNLMNLSANLYAGH
ATLLLKPVDVLETGNQTWSMIPGSSIKPLSEQYLLHTVKLLNIFHNVINDLVPIVPQSKT
VLPHLPSTGTLSPIKRRKSDERKIPIAPGKIVMEREEKKEYIKSALVGFFGGSQHYMKIF
DILRGAFINYKSSLDPKDSKNLIDLLQKTLQTLSVILEVTTLSEFGRISEEVLTYLQSTF
LLDSILTVRCVQQLLKCLFGSNLTSNVTDILDENLKKKESNNFSFYHNIFQKPCEEILIC
VNSLKSISKIECDGDSTIMGYLHRRDIKKPISITRTSDKILASYLKIFEPIVIKSLEEYI
ITSNVKFQCSVLQLLSQLVQLRVNYCLFDSDQVFKNFVLKQVEYIEAGQVPHSEELTPRI
FKFLVHLSYSKQHSRNIISIPEIIQLCDGLMASGQDPKTHYIPALEPIVQDVFLIRNRSN
TTDVKELETTREVILSMLLRLLEYREVIKLVTLVLEDSKYCIDDTDKWYRWSNQVVVVFL
QMLKQNRIKIENKETFAALRKFIFALNPNVFKPCDDLIIMLFQAPPSSEDTAMLRRWISK
VILLLLILSPLKEDVLISKINNLKDEFSPGCIHENFIATADPLNVHNNADAFQNVFGEDI
IARMFFRVITFTTKHVMELCKNNSNLFLVSQFSVFLMYCLHVFQSGSLCKVSQIAISLLN
EKNSNDVDINILNQRFIEIGKWYPTVTFQWCHILSVLHYNELQFWTNMITTKGHGPINNC
IVNVGNTIVFCDYLNENISETKQLSWNLSENSENLINLIGEVPVSEFITFIHRNATLSRL
FIHSIDQKYLDVKTAIFKIKVLKCLENSHSSQTGAVIKLLIPKMLSNRQIAISRMVGNLA
SRKVEYLFTLPLEEVHCQLSKDDLFIIKEELNLMNLSKKYETLISLFNKLLIQYYDMSPL
DFNRSRMINHEYIKKQQINKKWLLSQIQNKYQDGALRKENAKVMAKLEYTELISFMSSED
FNKLIFRDCFEIGMQIVRDHQLKQEPPILKASIDCVLREIAVITNDICSNHEVFKMSATE
QQNSYTKKILQSFKDEKFFNSVLNINLSLAVLMKALESLPTIQLSEIDSENISKFAVVSL
EFIGFIIDVDNKYINVSSLDIFINTSNEILKQSQFSSYLGLDSNISWLCSSINVLHYFLG
YLLRHEEPLPSSESIMLSITSDNIEVNQAMESSHNLYILVQWLYSYQRSTMKIPRFLLEP
IKSLIVSLARLPLVNSYNLIPSRVWKLGWQPVLSGKFSTQVPPLPIEMLQEVDVLEEYIF
RFLVCRVILLGWMSRQQFEETWMCFLSVLCSNLDSPDSADINSVLQASSLSIKAFTALLM
QTLRYPVLGNNNISEMIHVSRNVPIQGAALSVTKLMAVQNLIEHKFTELSPQTKTSKIRN
VFSQKNFEKSSNQYSYGQMSIKYFLICTSPEKQSKNCFAETVLNNRTRSLEEYGLDINSC
LQFLLEYYTPLMKNENTGLRILHETVRSTLFISDLFTDKSQFDWMLVMFLELAKTHAVED
ELIHQYLLVGICKCVGVLSPDLEIYEQTKKLLVQFLKSPFTSTRISCLYGLLYILEGCIL
NNSKIAGISEELQLILPCAVEYVLQHFNTQNPVLRGCQEHTLLVWSVAFYLIENVDDIHM
EKNFVINMLQSAFTMLKNKMASDDLEVEIIKSLERLLLVRPMYILERFGKSIQKLALEKL
KDENPLDSILGVQLLITYMYVDCWEHLERPEADNEQTSPDHLVQTIEKLSAIFERIKRSY
AIEVEVLCSVLPLILKDFFSPSDILTKVIGEFLSPQQPHLKLMSGVVFQVFETAIEQCQL
SLLQDWVVFSLANFTQSFSNTANTWCLTCFFISASSSEWLRSYFPYVQNRVGRYEYEDKK
IFCIAGVDFYRNLTNDKQRQAFVDSFVKVKDQLEMPFSDLLNSL
NT seq
8415 nt
NT seq
+upstream
nt +downstream
nt
atggcaacccaagaaaagctacaaagatcgctcgaggccttaaagaatctttcaagcctt
ccacattctccagatccaataaggaaaaaggaaaagatccatcattgtcatattgttact
gaagccttttcaaattcaacaatcaaagtttcaacaaaatttcaagttctactcaatttt
acaattgatacattcttgcaattatgtgatgaccctgaatctgatattcgcatgacaagt
gatgaatgtctcaatagaataattcgtactgtaagtgctgagcatatagcaaaagttctg
attatactccataaggaaatatcaaaaaatggctcagcaaggtctctaagagctgcactt
gttaggttttcccaattagcccatcatataaaacctcataaaggaaaggtttatgttata
aatttctttcctagtattataagaataacaaaaagaacagaggaaccaattcatgaaact
ttagccaattgtttgccaaagattataaatgtgttgggcccttttgctacagatgctgat
attgagctgctattaaaagcttttttaaacaatatcaacaactcttcccctactgtcaga
cgagctgcatcaaattgtattttaagcatttgtataaattcaagaaaaccatacattttt
gtaacatattgtgttaatatattgttaggtctgataattcctgtagatgatactcatgat
aattatgttattttgggagtattatatagtttaaagttgttactgcctgcattaatagat
tcaaatattaacaatgatggatttagttattcaaaagatatagaaataattcagcctctt
gctctcagtaaatttcttcagatttatgaattatgtttgttttatataagaaacaaggac
cacaatattattaatgcttcattagagactttaaatgttctattatcgaatataactgct
gatttgaagaacaaacttttatctcccagtggagtagataagtgtagaatacacaagagc
caatccttcaataacataaaatcacccagccaattgagtattgctactaatacaacttct
gctgaggaaacattattctcagaatgtgatctgactgaaaccatagaaagtgatatagga
aaatggattggagaatccaagttatcagtaattaatatgcctcatgggaatgctgcagat
gaagacatcatagaacctgtaatgactagcaatgaggataacatagctgctagtagctgt
gaaaataatgttcggaaagaacagaacaaatttgggatagaactgagaaaaattggcaat
gctgacactattgataagttaagcaataaatcatctgaagaaagtattacggcttcagaa
agtgtagacaagttacttgatcatgacttagataatcaggaagtcgatattggaaagtat
ttggataaaaatgtatcgctgtcatattgcgctcgccttattataaaatcatttctatta
tgtggagtcgcaggaaaatgtataagtgataagacagtgagggtgtcagtaaaatcttca
gccttgtgttgtctctcttccatatttcgcctctatcctcaagttttcttccagtatcta
aacaaaaatggtacaaatgactctaaaagtcaactcagcaagatcagtcaccagaaaata
tcagatattcttttattttctgaacactccgatccgcaactaagaggcaacattcgaatg
attgtgtcagatttgatttccgccattctattggaaagtaatctagattttgatctgtgg
attaaaaataatataaatcaaagaaatattccgaaagatgggacgtgttatcacatgact
gattttattgctattctgtctaaaggtttgcaagacgagaattccaattgcctcaaacaa
actttgataagcctcaatcctgttttaatgctactggcggagtctaaaaattgtcatgat
attttatctctactagatacactgccatatctagctaacaatccatactggttagtgaag
gtttctttatgcgagttggtttccaagttgtcctacgtcacactttttcacataacagaa
aatagcatatttcaaagcaaagtgttatataacatattgtttctatttttgaaagatagc
gatcaaaggatccgaagcgcagcgtcagcatcattaaccgaaataattgaaaacctgtac
tttgaagaataccatccaatggaaagtcatgtaactaccaaagctattttaattaacaat
aaattgggctttaaaaacagcaccggagaaatgaatctgcaaaggaaacaatttatagaa
tctatgcccttcccatacttgaaaatcggcggatcaatcagtaaatcaatcgactactcg
ttgtcgaaaatagtgatgcatctgtattccacagtattatcaacacaatcgaaatatctt
atttacggaggcattgaagctttatcgcttctctccaacaaatatccctgcacaatatat
cggaaatcgtggtgcgactctaaacatttcaaggacaatgatgttgaggtatccatgacc
tacagttccgaggatcttttcactttatgcgtagactatttaacgaattcaatttacgtg
tacgacatagcatttatgaacaatttaatgaatttatcagctaacttgtatgcaggtcat
gctactttactattaaaaccagtagatgtactagaaaccgggaatcaaacatggtcgatg
atccccggtagctcgattaaaccactctccgaacaatacttactgcacacagtaaagcta
ctgaacattttccacaacgttattaacgatttagtaccgattgttcctcaatcgaaaacg
gtattgcctcatttgccatccactggtacactgtcgccaataaaaaggagaaaaagcgac
gaaagaaagatacccatagctccagggaagattgttatggagagagaggaaaaaaaggaa
tatatcaaatcggcccttgtaggattcttcggcggatctcaacattacatgaagatattt
gatatattgcggggtgcctttattaattacaaatcatccttagatccaaaggactcgaaa
aacttaatcgatctcttgcaaaaaactttgcaaaccttatctgtgatattggaagtgact
actctgagcgaatttggtcgtatatccgaagaagttttgacgtacctacaatctacattt
ttactagattctattttaacagtacgatgtgtccaacaattacttaaatgcctttttgga
agtaacttgacatccaatgttacagatatacttgacgaaaaccttaaaaagaaagagagc
aataatttcagtttttaccacaatattttccaaaaaccctgcgaagagattttgatttgc
gtaaattcgttaaaaagcatcagtaagattgaatgtgatggtgacagtacaattatggga
tatttacatagacgtgatataaaaaaaccaatatcaataacgagaacttccgataaaata
cttgcaagttatttaaaaatttttgaaccgatagtaatcaagtcattggaggaatatatc
atcactagcaatgtaaaatttcaatgcagtgtattgcaattattaagccaattagtccaa
ctaagagtaaattactgtttatttgactcagaccaagtgttcaaaaatttcgttttaaaa
caggtcgagtatattgaggcgggtcaagtgcctcactccgaagaacttactccgagaata
ttcaaatttctagtacacctatcttattccaagcagcattctcgaaatatcatcagtatt
ccggaaataatacagctctgtgatggattgatggccagtggtcaagatccaaaaacccac
tacattccagcattggagcccatagttcaagatgtctttttgatcagaaacagatcaaac
accactgacgtgaaggaattagaaacaactcgagaagttatattatcaatgcttttgcgt
ttacttgaatatagagaagtaatcaaattagtgactttggtcttggaagacagcaagtac
tgcatcgacgatacagacaaatggtatagatggtccaatcaagtggtagttgtgttctta
caaatgttgaagcaaaaccgcataaaaatcgaaaataaagaaacgttcgcagccctcagg
aaattcatattcgctctaaatcccaacgttttcaaaccctgtgatgacctaatcataatg
ctgtttcaggctcccccatcatcggaagacacggctatgttaaggcggtggatctcgaaa
gttatcctcttgcttttaatactctcacctctaaaggaagacgtattgatctcgaaaatt
aacaacttaaaagatgaattcagtcctggttgtatacatgaaaattttatagccacagca
gatcctctaaacgttcacaataatgctgacgcctttcaaaatgtctttggcgaagatatt
attgcaagaatgtttttccgagtaatcacatttacaacaaaacatgtaatggaattatgt
aaaaacaacagcaatttgttcctggttagtcagttcagtgtattcttaatgtactgttta
catgttttccaatcaggaagtctttgtaaagtttcccaaatcgctatatccttactaaac
gaaaagaattctaacgatgtcgatattaacatactcaaccaaagatttatagagattggt
aaatggtacccaacagttacatttcagtggtgtcatatattaagtgttctacactacaat
gaactccaattttggacaaatatgatcaccaccaaagggcacggtcccataaacaattgc
attgttaacgttggaaatactatagtattttgtgattatttgaacgaaaatatttctgaa
acgaaacagttatcatggaatttatccgaaaactctgagaatctcattaatttaataggc
gaagtgcctgtatcagaatttatcacatttatacataggaacgcaacgttaagtcgtctg
tttattcatagtatagatcagaaatatcttgatgttaaaacagcaatatttaaaataaaa
gtactgaagtgtttggagaacagtcattcgtctcaaactggcgctgtgatcaaattatta
atacctaaaatgttaagtaatcgtcaaatcgccatatcaaggatggttggtaacctagct
agccgaaaggtcgaatatctttttacattgcctttggaagaagttcactgccagctttca
aaagatgatctgtttataataaaagaagaattaaatttaatgaatttatctaaaaaatat
gagactcttatcagtttatttaataaattgttaatccaatattatgacatgagcccatta
gattttaatcgttcccggatgataaaccatgagtacatcaagaaacagcaaataaataaa
aaatggttattatcccaaattcaaaacaaatatcaggacggtgcattaagaaaagaaaac
gcaaaagtgatggcgaaactggagtataccgaactgatcagttttatgtctagtgaggac
tttaacaaactcatttttcgagattgtttcgaaattggaatgcaaattgtaagggatcac
caactaaaacaggaaccacctatccttaaggccagcattgattgtgttttaagggaaatc
gcagttataactaatgatatttgtagtaatcatgaggtttttaaaatgtctgcaactgag
caacaaaactcttacaccaaaaaaatactgcagtcttttaaggatgagaagtttttcaat
tcggtcctaaatataaatttatcattagcagttttaatgaaggccctcgaaagcctaccg
accatacagctttctgaaatcgattccgagaatatatcaaaatttgctgttgtttcgttg
gagttcatcggtttcatcatagacgtcgataataagtacatcaacgttagttccctggat
attttcataaatacatctaacgaaatactcaagcagtcacaattttccagttatctggga
ttggatagcaatatatcttggctgtgttcatcaatcaatgttctgcattactttctagga
tatcttttgaggcacgaagaaccgcttccttccagtgaatcgattatgttaagtattact
tcagataacattgaagtgaatcaagcgatggaatcgtcgcacaatttgtacattctggtt
cagtggctatatagctatcagagaagcaccatgaaaattccaagatttcttctagaaccc
ataaaaagtttaatagtatcattggcacggctacctcttgttaattcatataatcttatc
ccctcgcgagtatggaaactaggatggcaacctgtactaagtgggaagttttccactcaa
gttcctccattaccaattgaaatgttacaagaagttgatgttttagaggaatatatattc
agatttttggtttgtagagtaattttgcttggctggatgtctagacagcagtttgaagaa
acatggatgtgttttctgagtgtactatgttctaatctagacagtccagattcagctgat
ataaatagtgtcctacaggcatctagcctatctataaaagcgtttacagcactgctcatg
cagacgctgcgatacccggttttaggaaataataacatatctgaaatgatacatgtatcc
agaaatgtaccgatccaaggagccgctttaagtgtaaccaaattaatggcggttcaaaac
ctcatagagcacaaattcactgagctctctccacaaaccaaaacaagcaaaatcagaaat
gtatttagccagaagaacttcgagaaatcttcaaatcaatattcttacggccagatgtct
atcaaatattttttgatatgtacatccccagaaaagcagagtaagaactgtttcgcagaa
actgttttaaacaaccgtacaagatcgttggaggaatacggtttagatataaattcttgt
ctacaatttttattggagtattatacaccacttatgaaaaacgagaataccggtttaaga
atattacatgaaactgttagatcgactctattcatttcggatctatttaccgataaatct
caatttgattggatgttagttatgttcctggagctggcaaaaacccacgctgtcgaagac
gaactcatacatcagtatttattagtgggtatctgcaaatgtgtaggtgttttatctccg
gatttagaaatctatgaacaaacgaagaaactcctcgttcagttcttgaaaagcccattc
acttcaactagaatatcctgtctatatggcctactctatatcttagagggatgcatcctc
aataattctaaaatcgcaggcatatctgaagaattgcaactgatattaccttgtgcagta
gaatatgtactgcagcatttcaacacccaaaatcctgtcttaagaggatgccaagaacat
accctactcgtctggtccgtagccttttacttgatagagaatgttgacgacattcatatg
gaaaagaactttgtaattaatatgctacaatcagcgtttaccatgctgaaaaataaaatg
gccagtgacgatttagaagtggaaataattaagagtttggaaagacttttacttgtaagg
ccaatgtacatattagaaaggttcggtaaaagtattcagaaactggctttggaaaaactg
aaagatgagaatcctcttgattcgattttaggagttcaattgttaattacctacatgtat
gtcgattgttgggagcatttagaaagacctgaggcagacaatgagcagaccagtccggat
catttagtacaaactattgaaaagttgtccgcaatatttgagaggatcaaaagaagctac
gctatcgaagtagaagtattatgttcagtattgccactaattctgaaagatttcttctcc
ccgtctgatatactgacaaaagttattggtgaattcttgtcccctcaacaaccacatttg
aaattaatgagtggtgtagtgtttcaggtttttgaaactgctatagagcagtgccagttg
tcactactccaggactgggtagtcttcagtttggcgaacttcacacagtcattttccaat
accgcaaatacatggtgtttaacctgttttttcatcagcgcaagttctagtgaatggtta
cggtcatatttcccttacgttcaaaatagagtaggtagatacgagtacgaagacaagaaa
atcttctgcatagccggcgtagacttttatcgaaatttaaccaacgacaaacaaaggcag
gcctttgtcgatagttttgttaaagtcaaagatcagttggaaatgcccttcagcgacttg
cttaattcgttataa
DBGET
integrated database retrieval system
