Rhynchophorus ferrugineus (red palm weevil): 143199689
Help
Entry
143199689 CDS
T11283
Symbol
Ssl1
Name
(RefSeq) general transcription factor IIH subunit 2 Ssl1 isoform X1
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
rfg Rhynchophorus ferrugineus (red palm weevil)
Pathway
rfg03022
Basal transcription factors
rfg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rfg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
143199689 (Ssl1)
09124 Replication and repair
03420 Nucleotide excision repair
143199689 (Ssl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rfg03021
]
143199689 (Ssl1)
03400 DNA repair and recombination proteins [BR:
rfg03400
]
143199689 (Ssl1)
Transcription machinery [BR:
rfg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
143199689 (Ssl1)
DNA repair and recombination proteins [BR:
rfg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
143199689 (Ssl1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
VWA
C1_2
DUF8617
Motif
Other DBs
NCBI-GeneID:
143199689
NCBI-ProteinID:
XP_076265788
LinkDB
All DBs
Position
Unknown
AA seq
419 aa
AA seq
DB search
MNDDEDPKEYRWETGYEKTWEAIKEDDEGFLEASVADIILRAKRKRQAQKQGSQKLGMMR
HLYLILDCSESMSSQDLKPTRMICTLKILEGFIEEFFDQNPISQMGIILMQNKRADKLSE
LAGNFRKHIKYLKSLSKTNLIGEPSLQNGLDLAISSLKLLPSHASREILVIMGSLTTCDP
GDICTTVTKLKQEGIRCSIIGLAAEVRVCRFLANETKGTYNVILDDCHFKDLLYQQVEPP
PAAVALESSLIKMGFPHQMNTEGTEEPLTMCMCHVDSTEEGSKLTTGGYYCPQCFSKYCE
LPVECRACGLTLVSAPHLARSYHHLFPAANYVEVAMANSAENCYGCQKNFTDEDKNVYRC
PKCLFADFALIPPARSKSLTELIPSKVSHILFSYISEVFGLNVFYAVGFQDLELFFIYS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacgatgaagatcctaaggaatatagatgggagactggttatgaaaaaacatgg
gaggctattaaagaagatgatgaaggattcttggaagcctccgtagctgatattatttta
agagccaaaaggaaaagacaagctcaaaagcagggtagtcaaaaacttggtatgatgagg
catttatatttaatattagattgttcagagtccatgtcaagtcaagatttaaaaccaact
cgaatgatttgtacattaaagattttagaaggatttattgaggaattctttgatcaaaat
ccaataagtcaaatgggaataatattaatgcaaaataaaagagctgataaactgagtgaa
ttagctgggaattttagaaagcatattaaatatttgaagtcactttcaaaaacaaattta
ataggggagccatctcttcaaaatggtttggatctagcaatttcttctcttaaattgtta
ccctcccatgctagcagagaaatattagtaattatgggaagtttaaccacatgtgatcct
ggagatatatgtaccactgtaactaaattgaaacaagagggaataagatgctcaattatt
ggtttagctgcagaagtacgtgtttgtaggttcctagctaatgaaactaaaggaacatat
aacgtaatattggatgattgtcattttaaagatttgctataccaacaagttgaacctccg
ccagcagctgttgctttagaatctagtttaataaagatgggttttccccatcaaatgaat
actgagggtacagaagagccacttacaatgtgtatgtgtcatgtagacagtaccgaagaa
ggaagtaaacttacaacaggtggttattactgtccacaatgtttcagcaagtattgtgaa
cttcctgtagaatgtagagcttgtggtttaacactggtctctgctccccatttggctcgt
tcctatcatcatctgtttccagcagctaattatgtagaagttgccatggcaaactctgct
gaaaattgttatggttgccaaaaaaattttactgatgaagacaagaatgtatacagatgt
cctaaatgtttgtttgccgactttgccttaatcccacccgctcgaagcaaaagcttgact
gagttgattccctcaaaagtttcacatattttattctcatatattagtgaagtatttgga
cttaacgttttttatgcagtcggttttcaagatttagaacttttcttcatttattcttaa
DBGET
integrated database retrieval system
