Rhynchophorus ferrugineus (red palm weevil): 143201005
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Entry
143201005 CDS
T11283
Symbol
Rga
Name
(RefSeq) CCR4-NOT transcription complex subunit regena isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
rfg Rhynchophorus ferrugineus (red palm weevil)
Pathway
rfg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rfg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
143201005 (Rga)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rfg03019
]
143201005 (Rga)
Messenger RNA biogenesis [BR:
rfg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
143201005 (Rga)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
143201005 (Rga)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
NUDE_C
Motif
Other DBs
NCBI-GeneID:
143201005
NCBI-ProteinID:
XP_076267957
LinkDB
All DBs
Position
Unknown
AA seq
404 aa
AA seq
DB search
MANLNFTRTLGGNNLARTSVGFGNNPMSGHVTPVFGQRPSSERRPVPSMGNSNQMGNINT
SMNTLGGYSSFNSVFGSGDANTPSLLDLSEFPSLTNRNSGDVPQPSPMPGAKPYVGMVKQ
ADQLKRQLMFQPTSETSEFTMSSEDFPALPGTQNRMEGASPAGSQSDEKNAQEGGSDCQI
PPSASTQSSGGNADKTPNKQSGGIRSTPDGRVSNIPANMVSDQFGVVGLLAFIRAAESDP
NLVSLALGQDLTALGLNLNSPENLYPSFGGPWADHPCRPQDVDFHVPPEYLINHAISFVF
CRDKLAAMKLSRYKDDLLFFMFYTSVGDVLQIAAAAELYGREWRYHMEEKVWITQVPGMA
HIEKTQTYERGTYYFFDVQSWRKVAKEFHLDYSKLEGRPVLNST
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacttgaactttacaagaaccttaggaggtaacaacctcgccaggactagtgtt
ggttttggaaataatccaatgtctgggcatgttaccccagtatttggtcagagaccatca
tctgaaaggaggcctgttccttcaatgggaaactcaaaccagatgggtaatattaacacg
tcaatgaacactctaggcggttatagttcctttaattccgtattcggttcgggagatgcg
aacacgccgtcacttttggatcttagcgagtttccgtcattgacgaatcgtaattcagga
gatgtgccccaaccaagtccgatgcccggggcgaaaccctacgtgggaatggtcaaacag
gccgatcaattgaaacgtcagttgatgttccagcccacgtctgaaactagcgagtttacc
atgtctagtgaggattttcccgcgttgcctggaactcagaatcgaatggagggagcgtcg
cccgcgggcagtcagtcagacgagaagaacgcacaagaaggcggatcggactgccaaata
ccaccatctgcgtcgacgcagtctagtggtggcaatgccgacaagactcccaacaagcaa
tcaggcggtattcggtcgacgcctgacggtagggtgagtaatataccggccaatatggta
tcagatcagtttggtgttgtcgggttgcttgccttcattcgagcggccgaatccgatccg
aacttggtgtcgctggcgctaggtcaggacctaaccgcccttgggctgaatctcaattca
cctgagaacctgtacccatcgtttggcggaccctgggccgatcatccgtgtcggccacag
gacgtcgactttcacgttccaccggagtacctcatcaatcatgcgatcagttttgtattt
tgcagagacaaacttgctgctatgaagctgagccggtacaaagatgatctcttgtttttt
atgttttatactagcgtaggcgacgtacttcaaatagcagctgctgccgaactgtacggt
cgagagtggaggtatcacatggaagagaaggtatggataacgcaagtacccggcatggcc
catatcgaaaagacgcaaacctacgaacgaggcacctactatttctttgacgtccaaagt
tggagaaaggtcgccaaggagttccatctggactacagcaagctggagggacggcccgtc
ctcaacagcacgtga
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