Rhynchophorus ferrugineus (red palm weevil): 143201104
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Entry
143201104 CDS
T11283
Symbol
Cpsf100
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
rfg Rhynchophorus ferrugineus (red palm weevil)
Pathway
rfg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rfg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
143201104 (Cpsf100)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rfg03019
]
143201104 (Cpsf100)
Messenger RNA biogenesis [BR:
rfg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
143201104 (Cpsf100)
U7-dependent histone pre-mRNA processing factors
143201104 (Cpsf100)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
Baculo_FP_2nd
Motif
Other DBs
NCBI-GeneID:
143201104
NCBI-ProteinID:
XP_076268065
LinkDB
All DBs
Position
Unknown
AA seq
738 aa
AA seq
DB search
MTSIIKLQVLSGAMDESPPAYLLQVDDVKILLDCGWDEKFNMEFIKEIKRHIHQIDAVLI
SYPDIVHLGALPYLVGKLGLNCPIYSTIPVYKMGQMFMYDLYQSQHNMKDFVLYNLDDVD
ATFEKIIQLKFNQSVHLKGKGYGLTITPLPAGHMIGGTIWKIMKAGEEDIIYANSFNHKK
ERHLNGCELEKLQRPSLLIIDAFNATYQQARRRARDEKLMTNILQTLRNNGNVLIAVDTA
GRVLELAHMLDQLWRNKESGLLTYSLALISNVAYNVVEFAKSQIEWMSDKLMRSFEGARN
NPFQFKHLYLCHSLQELNKVASPKVVLASSPDLESGFSRELFLQWCSNPNNSVIITTRTC
PGTLARDLIDNNEKGRTIDVIVERRVKLEGSELEDFERRQHQRSMDKSMKEDGDSDSDSD
IEMSVISKGRHDIVIKQEGKMSGGFFKVTKKQYPMYPFHEEKIKCDEYGEIVKIEDYRLA
DINPEAEDNKENHEVKNEEEEDEIIEIEETPSKCIALERTIQVNCHVQYIDFEGRSDGES
MMKILSQLRPRRVIVVQGSEENTQVIAKHCSENIRARVFTPQRGEIVDATSETHIYQVRL
TDSLVSQLDFQKAARDAEVAFVNAQIALREKQADARRMTTDNELMEVDDDETKILTLEPN
AIECEHEPAFINELKLSDFKQVLAKANVSSEFSGGVLWCCNGTIAIRKMDTGKIVFEGCI
SDDYYRVKELLYDQFAIL
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgacgtctattattaagctgcaagttctttcgggagctatggatgaatcgcctccagca
tatctgcttcaagttgacgatgttaaaattttattggactgtggatgggatgaaaagttt
aacatggaatttataaaagaaataaaacggcatattcatcagattgatgcagtgttgata
tcttatcccgatatagttcatttgggagctctgccatatcttgtagggaaattaggttta
aattgtcccatatattcaactattccagtttataaaatgggtcagatgtttatgtatgat
ttataccaatcacaacataacatgaaggattttgttctatataatttggatgatgttgat
gccacctttgaaaaaatcatacagctgaagtttaaccaaagtgttcatctgaaaggaaag
ggatatggtttaacaataacacctcttcccgctggtcatatgattggtggtacaatttgg
aaaattatgaaggctggagaagaagatattatttatgccaattcctttaatcacaagaaa
gagagacatttgaatggatgtgaactagaaaaattacaaagaccttcattgttaattatt
gatgcttttaatgcaacttatcaacaagccagaagaagagcgagagatgagaaacttatg
accaatatattacaaactttaagaaacaatggtaatgtcttaatagctgttgatacagct
gggagagttcttgagctagcacatatgttggatcagttatggaggaataaagagtctggt
ttgttaacatactccttagctctgataagtaatgttgcctataatgttgttgagtttgca
aaatctcagatagaatggatgagtgataaactaatgaggagttttgagggtgcccgtaat
aaccctttccaattcaaacatctctatttgtgtcacagtttgcaagaactgaataaggta
gcgagccctaaagtagttttggctagtagtcctgatttagaaagtggattttccagagaa
ctgtttttacagtggtgttcaaatcctaataacagtgtaattataacaacaagaacttgt
ccaggtactttagccagagatttaatagacaacaacgaaaagggtagaacaatagatgtt
atagtagaaagacgagttaaactggagggaagcgaattggaggactttgaaagaagacag
catcaaagaagcatggacaagagcatgaaggaagatggagacagtgattcagacagtgat
atagaaatgtcagtaatatccaagggaagacatgatatagttattaagcaggaaggcaaa
atgagcgggggtttcttcaaggttacgaaaaagcagtaccccatgtatccattccatgaa
gagaaaataaaatgtgatgaatatggtgaaattgtgaaaatagaggactatagactggca
gatattaatccagaagcagaagataataaggaaaatcatgaggtgaagaatgaagaagag
gaggacgaaattattgagattgaagaaaccccatcgaaatgtatagctttagaacgtacc
attcaagtaaactgtcacgtacaatatatagattttgagggacgttctgatggcgagtca
atgatgaaaatcttgtcccaactgaggccgaggcgggtgattgtagtgcagggttcagaa
gaaaatacgcaggtcattgcaaagcattgcagcgaaaatattcgtgccagagtcttcacg
cctcaaaggggggagattgtggatgctactagtgaaacgcacatttatcaggttcgactg
acggattccttggtgtcgcaattagatttccagaaagcagcgcgtgacgctgaagtggca
tttgttaatgcgcagatagctttaagggaaaaacaagcggacgccaggcgaatgacaaca
gataatgaactgatggaagtggacgacgatgaaacaaagattttaactctggaacctaac
gcgatagaatgtgagcacgagccggctttcattaacgaactgaagttgtcagatttcaaa
caagtattggccaaagccaacgtaagctctgaattctcaggaggcgttttgtggtgttgt
aatggaacaatagctattcgtaagatggacacagggaaaattgttttcgagggctgtata
tctgacgattattaccgagtaaaggaacttctgtacgatcagtttgcgattttatag
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integrated database retrieval system
