Rhynchophorus ferrugineus (red palm weevil): 143201229
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Entry
143201229 CDS
T11283
Name
(RefSeq) DNA excision repair protein ERCC-6-like isoform X1
KO
K10841
DNA excision repair protein ERCC-6
Organism
rfg Rhynchophorus ferrugineus (red palm weevil)
Pathway
rfg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rfg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
143201229
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rfg03036
]
143201229
03400 DNA repair and recombination proteins [BR:
rfg03400
]
143201229
Chromosome and associated proteins [BR:
rfg03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
143201229
DNA repair and recombination proteins [BR:
rfg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
143201229
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Motif
Other DBs
NCBI-GeneID:
143201229
NCBI-ProteinID:
XP_076268267
LinkDB
All DBs
Position
Unknown
AA seq
992 aa
AA seq
DB search
MDQQNEELQNLVSQGITLWGRSQETLEKQALKELEIFVEESHENKATDRILSQLEIKHGK
DEQINNNQFVANISSGNENKSNLENDGCSIIEHPTYNGHTDGSESDYIPSAGELSDEDYE
PFSVKNRTSKKPIKRKSQDKTCQFKKSKIKDDALESNYKARLNEYYNKVENDLERIQNED
DLEEINGYKKIKGGFKVPKTLWNKLYEYQKDAVKWLWGLHQKPSGGILGDEMGLGKTVQI
IVFLHALQFSKIISKHGKFVGVGPTIIVCPATVINQWVTHFHEWSPEFRVAILHQSGTYQ
GNKIKLINEINKSKGIIVTTYASILKYKGNLCDYNWHYLILDEGHKIRNPLAKITLAVKE
IRTPHRIMLTGSPMQNNLSELWSLFDFTNPGMLGSLATFTEHFVNPIVQGGFANSSPMQE
ATALSVASTLKNVITPFLLRRMKSEVKNDIQLPHKSEQVLFCALTKEQRDLYLSYLMSEH
VNAILNRGVRLWRSDNAIKANMLIAITALRKICNHPDLHMLQSPDCDETNIDNNIGYYKR
SGKMVVVSALLKIWKKQGHKTLLFSQGRSMIRIFESFLSNFGYRYLKMDGTTSISSRQSL
IDKFNQSDDYDVFLLTTRVGGLGVNLTGASRVIIYDPDWNPATDSQARERAWRIGQNKSV
TVYRLISAGTVEEKMYQRQVWKQLLSNKVLVDPSTNKFFKSSDLFDLFSLPDSTETNPET
TNIFRESRVKIQEKIKEKKPRKRKPKSGEAEDADQAVQFSQDKIKQMKALAQRIARNMSG
ESDMGKGEVKKTYVQIELEKERQEKLKEKQKLKSLSAPELIEYNRLKARPKIEEESNKLD
DNTTNISFDKALEHSSKTASLYHHKLQNKIPPVNCSSSSGQIKEEITETQQTCNKRKHKE
SVDTSGRIDGEDVEGLVKREKKKLKTEKSVTNDNFILEHLFSKKGVAGALEHESVLNGSK
KPSSLKDRTQADEKAQKALDALKKSRLNSWRW
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atggatcagcaaaatgaggaattacaaaatcttgtttcacaaggaatcaccctttggggc
agatctcaggaaactttagaaaaacaagctttaaaggaacttgagatatttgttgaagaa
agtcatgagaacaaagcaactgataggatattatcccaattagaaataaaacatggtaaa
gatgaacaaataaataataatcagtttgtagcaaatatttcatcaggtaatgaaaataaa
tctaatttggagaatgatggctgtagtattatagaacatcctacttataatggccacaca
gatggatctgaaagtgattacatccctagtgctggcgaattatctgatgaagattatgag
cccttttctgtaaaaaatagaacaagcaaaaaaccgataaagagaaaaagtcaggacaaa
acttgccaattcaaaaaatcaaaaattaaagatgatgccttagagtctaattacaaagct
agacttaatgaatattataacaaggtagagaatgatttggaaagaattcagaatgaagat
gatttagaagaaattaatggttataaaaaaattaaaggtggcttcaaggtacctaaaaca
ttatggaacaaattgtatgagtatcaaaaagatgctgtaaaatggttatggggtcttcat
caaaaaccatcaggtggtatattaggtgatgagatgggtttaggaaaaactgtgcaaatt
attgtttttctgcatgcacttcaatttagtaaaattatatcaaaacatggaaaatttgtt
ggtgttggtcctacaattattgtttgtccggcgacagtgatcaatcagtgggtaacacat
tttcatgaatggtcaccagaatttagagtagctatattacatcaatctggaacttatcaa
ggcaataaaataaaactaattaatgaaataaataagagtaagggtattattgtaaccaca
tatgccagtatcttaaaatataaaggtaacctatgcgattacaattggcattatctcata
ttagatgaaggtcataaaattcgaaatcccttggcaaaaataacactggcagtcaaggaa
attcgtacaccccaccggattatgctgactggtagtcctatgcaaaataatttgtcagaa
ctctggagtctgtttgactttactaatccaggaatgttgggttctctggctacatttaca
gaacattttgtcaatcctatagtgcaaggtggttttgccaattctagtccgatgcaagaa
gcaactgccctttctgttgcgtcaactttaaaaaatgttataacacctttcctgctgcgt
aggatgaaaagtgaagtgaaaaatgacatacagttaccccataagagtgaacaagtgtta
ttttgtgctctgactaaggagcaaagggacttgtatttaagttatttgatgagtgagcat
gttaacgcgattttgaacagaggtgtaagattgtggagaagcgacaatgccataaaagcc
aacatgttgattgccattactgccctgagaaaaatatgcaatcatcctgatttacatatg
ctccaatccccggactgtgatgaaacaaacattgataataacattgggtattataagcgg
tcaggtaaaatggttgttgtatcagcattgttgaaaatatggaagaaacagggacataag
acccttttgttttctcaaggaaggtccatgataagaattttcgagtcgttcctttcaaac
tttggatatagatatctcaaaatggatggtaccaccagtatcagttctaggcagagtctt
atcgataaatttaaccagagcgacgattatgacgtgtttttattgaccacgcgggttgga
ggtttgggcgttaatctaacaggcgccagcagagttattatttatgacccagactggaac
ccggcaaccgatagtcaagctcgagagagagcttggagaatcggtcagaacaaatcggtg
acggtataccggcttatatcagccggtactgtggaagagaagatgtaccagagacaagta
tggaaacagttgttgagcaataaagtactggtggacccttcaactaataaatttttcaaa
tcgtcggacctgttcgatctgttctccttgccggattccaccgaaaccaatccggaaacg
accaatattttcagggagtcgcgcgttaaaatccaggaaaaaataaaggaaaagaaaccg
cgcaagaggaaaccaaaatccggcgaagcggaagacgcggatcaagcagtccagttcagt
caagacaaaatcaaacaaatgaaagcgttagctcaaagaatcgccagaaatatgtcaggc
gaaagcgacatggggaaaggggaagtgaagaaaacttatgtacaaatcgaactggagaaa
gaaaggcaggaaaaactgaaagaaaaacaaaaattgaagagtttatcagctccggaatta
attgagtacaatagattgaaagctcgacctaaaatagaggaagagtctaataaactggat
gataatactacaaacatcagttttgataaagcattggaacacagttcaaaaacagccagt
ctttatcatcacaaattacaaaataaaatacctcccgttaattgctcgagttcgtcaggg
caaataaaagaagaaataacggaaactcaacagacgtgtaataaaagaaaacacaaggaa
tcggtcgacacgtctgggagaattgacggtgaagatgtcgagggtctcgttaaaagagag
aagaaaaaattgaaaacggaaaagtctgttaccaatgataatttcattttggagcatttg
ttttctaaaaagggagttgcgggtgctttagaacacgaatcagtattaaatggctcgaaa
aaacctagcagtttgaaagaccgcacacaagccgacgagaaagcacaaaaagcgctcgat
gctttgaaaaaatctagattgaatagttggagatggtag
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