Rhynchophorus ferrugineus (red palm weevil): 143201415
Help
Entry
143201415 CDS
T11283
Symbol
mrn
Name
(RefSeq) general transcription factor IIH subunit 4 marionette
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
rfg Rhynchophorus ferrugineus (red palm weevil)
Pathway
rfg03022
Basal transcription factors
rfg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rfg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
143201415 (mrn)
09124 Replication and repair
03420 Nucleotide excision repair
143201415 (mrn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rfg03021
]
143201415 (mrn)
03400 DNA repair and recombination proteins [BR:
rfg03400
]
143201415 (mrn)
Transcription machinery [BR:
rfg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
143201415 (mrn)
DNA repair and recombination proteins [BR:
rfg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
143201415 (mrn)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
143201415
NCBI-ProteinID:
XP_076268572
LinkDB
All DBs
Position
Unknown
AA seq
475 aa
AA seq
DB search
MADNGIGTSKQEISTLITQSNLECKNLYDYLKTRPSNILERLYNHPAICLAVYRELPELA
RQYVIRILFVEQPVPQAVVASWGSQAHSREHNYVTKVLTELNVWTEGSLPGGLLGWILSH
TFKRNLKIALLGGGKSWSMSSALEPDKNVRDINFLDTYSSERWECVLHYMVGSQQQEGIS
ADAVRILLHAGLMKRDEDDGSPVITRQGFQFLLLDRHAQVWHFLLQYLDTVDQRGLDLVE
CLTFLLQLSFSTLGKDYSTEGMSQGLLIFLQHLREFGLVYQRKRKAGRFYPTRLALNITN
TQSKSTVLLEEDTPKGYIVVETNYRVYAYTDSNLQVALIALFTELMYRFPNLVVGVITRD
SIRQALRGGITADQIIGYLKQHAHPQMLTSESKQPLPPTVVDQIKLWELERNRLVYHEGV
LYSQFLSQADFNVLREYAQSNGVLIWCNKEKRTLVVNKNAHDDVRKFWKKYSKGS
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggcagataatggtataggtacatccaaacaagagatttcaacattaattacgcaaagc
aatctagaatgtaaaaatttgtatgattatttaaaaactagaccatccaacattcttgaa
aggctttataaccatccggctatttgtttagctgtatacagagaattacctgaattagct
agacagtatgttatacgaatcctctttgttgaacaaccagttcctcaggctgtggttgca
tcatggggttctcaggcacattcaagggaacataattatgttaccaaagtattaacagaa
ttaaatgtgtggacagaaggttcactaccaggtggattattagggtggatactttctcat
acatttaaaagaaatctcaaaatagctttattaggaggtggcaaatcatggagtatgtct
tctgctctagaaccagataagaacgttagagatatcaatttcttagatacatattcgtca
gaacgttgggaatgtgtgctacattatatggtaggatcacaacaacaagaaggtatatca
gcagatgcagtaaggattttacttcatgctggtctaatgaaaagagatgaagatgatgga
agccctgtgataactagacagggttttcagttcctcttattagataggcatgctcaggtt
tggcactttttacttcaatatttagacacagttgatcaaagaggtttagacttggtagaa
tgtttaacatttttattgcagttaagttttagcacattaggaaaggactatagtacagaa
ggtatgagccaaggacttttaatttttttacaacatcttagagaatttggtttagtttat
caaagaaagagaaaggctggccgtttttatcctactagattagcattaaatatcacaaac
acacaaagtaaaagtacagtccttttggaagaggacactcctaaaggttatattgttgtt
gaaacaaattacagggtttatgcatacacagattctaatcttcaagtggcccttattgca
ttatttacagaacttatgtacaggtttccaaacttagtagtaggagtaattacccgcgac
tctataaggcaggccctcagaggaggtataactgcagaccaaataattggctacctcaaa
cagcatgcgcacccccaaatgttaacatcagaatctaagcaaccccttccccctactgtt
gtggatcagataaaattgtgggaacttgaaaggaatagattagtttaccatgaaggtgtg
ctgtacagtcaattcttatcacaggctgactttaatgttctgagagagtatgctcaatca
aatggtgttctgatttggtgcaacaaagaaaaaagaacactagtggtaaataagaatgcc
catgatgatgttcggaaattttggaaaaagtactccaaaggtagttag
DBGET
integrated database retrieval system
