Rhynchophorus ferrugineus (red palm weevil): 143201593
Help
Entry
143201593 CDS
T11283
Symbol
btz
Name
(RefSeq) CASC3 exon junction complex subunit isoform X1
KO
K14323
protein CASC3
Organism
rfg Rhynchophorus ferrugineus (red palm weevil)
Pathway
rfg03013
Nucleocytoplasmic transport
rfg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rfg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
143201593 (btz)
03015 mRNA surveillance pathway
143201593 (btz)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rfg03019
]
143201593 (btz)
Messenger RNA biogenesis [BR:
rfg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
143201593 (btz)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
143201593
NCBI-ProteinID:
XP_076268851
LinkDB
All DBs
Position
Unknown
AA seq
613 aa
AA seq
DB search
MEDAKESEVCVEKTQENPEVSAAVVEEKTSPENSEYDSVDSYSDDEQPIVKARSKASGLD
SETEGSVILEREEGDGQESAPTKKVDDDEDKKNPQYIPKRGTFYEHDDRTADDIEAQEAA
EADKDGKKKVWQDKKEKWKHDRFNDQEQAPKSRSELISIYGYDIRNEDGPPRARRRRRYG
RGPNKYTRNWEDEEAYSKPTPVRPKKPQRTPTRPKRGNQEEFPPLETDDYNQRSKSTESN
REGSVEKEEKAANKTESKQDHKERPKDQNQEHSDGHAEAEGAGTIKQNQSGRVGSGRVLK
PKKEIKDSDYRGFTKKTRQQRGMRNDQQKVLPPRNIKKDSEFIQSQNFTNKNSGKSGVAE
VEKELGELHIQDGPFKGNKAGSNNTQNRQGSVPPRLQQSEQKGSKRYSSMRQRSLPESGT
PPSSNFSFYPSDYNSTAPPPASQQPILPSPIPPQSLVPQPVPVTAAAPPLLPGPFPPGAP
FATQPPPQAYLQPGPPPYIAPPSQPQIVSYVPPGQPPYVQGYQGQFNSVTQPTDLYQPQG
GITYYSTDQQVVQRAAPQKRPKAAIPIVAPNDFKENKEQDKNQKEEAAPAAPEVTTTTTS
TVPAPPETVEVQE
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgcaaaagaatccgaggtgtgcgtagagaaaactcaggagaatcctgaagtt
tcagcagcagttgtagaggaaaaaacttcaccagagaattcggaatacgacagtgtagat
agctacagcgacgatgaacagccgatcgtaaaggccagatcgaaagcgtccggtttggat
tcggaaacagaagggagtgtgattctagaaagggaggaaggtgatggtcaggagagtgca
ccaactaaaaaggttgacgatgacgaggacaaaaagaatccacagtacattcccaaaaga
gggactttctatgaacatgatgacagaaccgcagatgatattgaagcacaagaagcagct
gaagctgacaaggatggcaaaaagaaagtctggcaagataaaaaggagaaatggaagcat
gataggttcaatgaccaggaacaagcacctaaaagccgttcagagctaatatcaatatat
ggttatgatattcgcaatgaagatggtcctccaagagccagaaggagaaggagatatggc
cgtggccctaacaaatatactcgcaactgggaggatgaagaggcttacagtaagccaaca
cccgtaaggcctaaaaaaccccagagaaccccaacccggccaaagaggggtaaccaagaa
gagttcccaccattggaaactgatgattacaatcaaaggtccaaatcaaccgaatccaat
agagagggcagtgtagaaaaagaagaaaaagccgcgaacaaaacagaaagtaaacaggac
cacaaagagaggcctaaggaccaaaatcaagaacactccgacggtcacgctgaggcggaa
ggggcagggacaatcaaacagaatcaatccggacgggtgggttcgggtagagtgttgaaa
cccaaaaaggaaataaaagactctgactataggggcttcactaagaaaacaagacagcaa
cgtggcatgagaaacgatcaacaaaaggtgctgccaccacggaatatcaagaaggatagt
gaattcatacaaagccagaatttcactaataagaacagtggtaaaagtggcgtggccgag
gtcgagaaggaactgggcgagcttcatatacaggacgggccttttaagggtaacaaggcc
ggtagcaataacactcagaataggcagggtagcgtgccgccacgtttacaacagtctgaa
cagaagggatctaagcggtacagctcgatgaggcagaggtccttgccggagagtggtact
cccccatccagtaacttcagtttctatcctagcgattataactccacagcgccgccgccc
gccagccaacagcccatattgccgagtcccatcccgccacagtccctagtgccccaaccg
gttcccgtcacggctgcggctccgcccctcctgcccggaccatttccgcccggcgccccg
ttcgccacccaacctcctccgcaggcctacctccagcccggcccccctccgtacatagcc
cccccgtcgcaaccccagatcgtcagctacgttcccccgggccaacctccctacgtccaa
ggctaccaaggtcaatttaactcagtgacccagccgacggacctgtaccaaccgcaggga
ggcataacgtattattcgaccgatcagcaggtggtgcagagggcggccccccagaaacgg
cccaaggccgccatccccatagtggcgccgaacgatttcaaggagaacaaggaacaggac
aagaatcaaaaagaggaagccgcacctgccgcccccgaggtcaccaccacaaccaccagc
accgtcccggcccctcccgagacggtggaggtccaagaatga
DBGET
integrated database retrieval system
