Rhynchophorus ferrugineus (red palm weevil): 143201961
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Entry
143201961 CDS
T11283
Symbol
faf
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase-like faf isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
rfg Rhynchophorus ferrugineus (red palm weevil)
Brite
KEGG Orthology (KO) [BR:
rfg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rfg01002
]
143201961 (faf)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rfg04121
]
143201961 (faf)
Enzymes [BR:
rfg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
143201961 (faf)
Peptidases and inhibitors [BR:
rfg01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
143201961 (faf)
Ubiquitin system [BR:
rfg04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
143201961 (faf)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
DUF2014
Motif
Other DBs
NCBI-GeneID:
143201961
NCBI-ProteinID:
XP_076269309
LinkDB
All DBs
Position
Unknown
AA seq
2456 aa
AA seq
DB search
MTVATRGQEIVEDNKETQTSIPGPSNVESHLDVEDTEPEFPKDKLAILDEKISNLRWVVP
VLPDQELEILLKASIELAKRNIDVKSEACQRFFREGLTISFTKILTDDAVSSWKANIHVC
IFQNCLKLIELCVAKLPHDWFPLLELLAMVLNPNNKFHSFNSSRQSETAGPSCILSEEEL
YARPSSDPRNPRGWLVDLINKFGELGGFQKLLERFQFGKNLTVSVVYALLTPFGQCYEFL
TPHTIHKFVLPILEMVPDILDKITDEELKREAKNEQKSDNVSLIIRSAKNLASKVPNQEE
LIRTLESFRLTMILRQLQISSFNGKMNALNEINKVISSVTYYPNRHHGVEEEEYLTPERM
AKWIKENKVLEIVLRDSLHQPQYVEKLEKILRFVIKERALSLSDLDAVWAAQVGKHEAIV
KNVHDLLAKLAWDFSAEQLDHLFECFQNSWTSASKRQRDRLLELIRRLAEDDKDGVMAHK
VLTLFWNLAHAEDVTTDIMDQAMTAHVKILDYSCSQERDAQKTVWLDKCVEELKNGDSWV
LPALKQIREICILYEQNLNGGHPQHTHHIYYRQEVIERLQNQHSLVILVTNSLTSYMENL
RALYKERPELTAETYIPDGRYCHTLQVQERLNFLRFLLKDGQLWLCADQAKQIWQCLAEN
AVFQSDRESCFRWFSKLMGEEPDLDPGINKDFFENNILQIDPVLLTESGIRCFERFFKAV
NIKEGKLKTKRRSILTEDPDLIGIDYLWKVVTLCSDDIAARAIELLREVSTNLGPKLLQS
RIDFHDQYIGECFDRLRAHYDTITILQKEVTEKEVESSGIINRIKAEAIKMCRVMKVMHE
YISEWDNAFIGERKILPLHRACYGKHLALIIRFSSVNRQVEDIELHTHSNDTLGSLRKSI
LRRIKPGVHCKLDLYVNGDTLDPADDRKLLCQIPIRDKTMISAKVIQINSNMASSQDSSS
DSSTSSPQHLYDGPNIEAEYFLPGVLMSQNPMYAEFFCQLMTLGSQLEFSPLRNCGYALL
KLMPCDVATMEKFKNRFSLSEQNITMDSVFFSASPAEVLYNLEVLYAMLMPAMDTLSDKT
YEFQYSFITSGEAHIFLEMLTKNNFMSTADSITRRSAYLVVLKICKLILTSVAHVLVRLS
EDHTPPENESSNENTTTPGMYLKQALRSVPGHSDFLLRQVSMKLSQGLAQLMVAETGNTG
QAQALFSQALNWELPDLATTLALVRLVWAASSDNLGSLNSSPETLHSLSNPLNQRMPVDL
DCEDILLCKEALELLSAAVVLNPSSLKHLYQDNWWPYFITDLVLLNPSCAVRVAAAEQLI
VICTCGAASRLALELIMPLLFSLLDTMVIDNANNSHEFFQLLSRLVSVAYLTGCPLNNAA
VLFANEVAWLKKARDKNEVLIEGHLGLAKELLSFMPLDQKCELGSEESGNLIRELLEDFL
FPASKLQLQLSKTKQLGEDPAIPICDTPQTQAAAFDLLISLCVNCVPNYKQLVSMLTEMF
YSDPSTAIGDWDYLPAVGPRPFRGFVGLKNAGATCYMNSVLQQLYMVDNIKEGILAAEGA
ATDPNEDFTGEERIDLDIDCNDDKNCIDDNRKDYNVGILKQVQAIFGHLACSRLQYYVPK
GLWRHFKLQGEPVNLREQQDAVEFFMSLVESLDEALKTLGQEQIMSKILGGSYSDQKICK
GCPHRYSKEEPFSVISVDIRNHSSLPDSMEQYVKGELLEGADAYHCEKCAKKVVTVKRLC
VKKLPPVLAIQLKRFEYDFERVCAIKFNDYFEFPRELDMEPYTVSGLAKIEGEIIDCDLD
PNATETCTKYRLSGIVVHSGQASGGHYYSYIRNRDPSGDVRWYKFDDGDVSECRMGEDEE
MKIQCFGGEYMGEVFDPMLKRTTYRRQKRWWNAYMLFYTRLDVEEESLVKSLNQMTLSTS
KQETHLKMPLAIENSIRKQNIKFLHHRSQFTIEYFSFIRKLATSCAQTNIRHGQSLSNDM
LEQQCLLSVQLVSNFLFHIGWHTKKNLRGPAIEWCDVLCLHLRTSSNIRTWFGMNMLFNH
MNRFCEYLLGCQSNEVRSAFIKIIVFLAHFSIKDPPCPCPPDINNPDPNATLSDHIIWAL
LGLLHGEVSEHSRHLPNYCTVFHMYANQGIQEKAQLLKLNVPYTFMLVALDEGPGPSIKY
QYADISKLTQLVSCLVRCCDISLKCQSSNGDVLPNPYREPTVQDYIMPISSQAADILFNR
TSYVKKVIEDVNLTDEAIKLLQFCSWENPQFSKTVLSELLWQIAFAYCQELRHHIEILLS
VLFIEDSWQSHRIHNAIKGIPDEREGLLETITRAKSHYQKRAYQCIKCLVALFTKCHIAQ
NMLLTQTDLRRAWASAVTWLQDELERKYPPNSQYAYNTWSPPAQSNESSNGYFLERSNSA
RKTLERALELMPEADRADDEGVEDTESQEESGQIESTEENLEICNEPQSPQQKSDI
NT seq
7371 nt
NT seq
+upstream
nt +downstream
nt
atgactgttgcaacaagaggacaagaaattgttgaagacaacaaagagacacagacatca
attcctggcccttcaaatgttgaatcccatttagatgtagaagatacagagccagaattt
ccaaaagataaactagctattttggatgaaaaaatatcaaatttgagatgggtagtgcca
gtgttacctgatcaagaacttgaaatacttttgaaagcatcaattgaattagcaaaaaga
aatatagatgtaaaatcagaggcatgtcaaagattttttagggaaggtttaacaatttca
tttaccaagattttaactgatgatgctgtatcaagttggaaggcaaatattcatgtctgt
attttccaaaattgtttaaagctcatcgagctttgtgtcgctaagttgccacatgattgg
tttcctctgttggaattattggcgatggtactaaacccaaacaataaatttcacagtttt
aactcctctagacaaagtgaaacagctggtccatcatgtattttaagtgaagaagagtta
tatgccaggccttcatcagatcctagaaatcctcgtggatggttggtagatttaattaat
aaatttggagagttaggcggttttcaaaagttgttagaacgatttcaatttggaaaaaat
ttaactgtatcggtggtttatgcactgttgacaccctttggtcagtgttatgaattttta
acaccacatactatccataaatttgtcctacccattttggaaatggtaccagatattttg
gataaaataacagatgaggaattaaagagagaagctaaaaatgagcaaaagagtgataat
gtgtcattgattatcagatcagcaaaaaacttggcttcgaaagtacctaatcaggaagag
ctaataagaactctggaaagttttagattaacaatgatactcaggcaactacaaatatca
agctttaatggaaaaatgaacgccttaaatgaaataaacaaagttatttccagtgtgact
tactacccgaaccgacatcatggtgttgaagaggaggagtatttaacgccagaaaggatg
gcgaaatggatcaaggaaaataaagtacttgaaattgtgctccgtgattccctccatcag
cctcaatacgtcgagaaactcgagaaaatattgaggttcgtcattaaggaacgcgctttg
agtttaagtgacttggacgccgtttgggccgcccaagttgggaaacatgaagcgatcgtc
aagaatgttcacgatcttttagccaagctggcctgggattttagtgctgaacaattagat
catctgtttgagtgctttcaaaacagttggacgtccgcttcaaaaagacaacgtgataga
cttctcgaactcattaggcgtttggcagaagatgataaggatggtgttatggcccataaa
gttttaacgttattttggaatctggcacatgcggaggatgttactactgatattatggac
caggccatgactgcacacgttaaaattctagattatagctgttcccaggagagagatgct
cagaaaactgtatggcttgacaaatgtgttgaagaactcaagaacggtgattcttgggta
ttaccggcattgaaacagattcgcgagatttgtatactatacgaacaaaatctaaatggc
ggtcatccccaacatacccaccacatatattatcgtcaagaagtaatcgaaagattacaa
aatcagcattccctggtgattttagttaccaatagtctcacgagctatatggaaaatctg
agggctctgtacaaagaaagacccgagctcaccgccgaaacgtacatcccagacggtcgg
tactgccacaccttgcaggtccaagaaaggcttaatttcctcagatttttactcaaagat
ggccaactgtggctgtgcgcggatcaagccaagcaaatctggcaatgcttggccgagaat
gcggttttccagtcggacagagagtcgtgtttccgatggttttcgaaactgatgggcgag
gaacccgacctggatcccggaatcaacaaggatttcttcgagaacaacatccttcagatc
gatcccgttctgctgaccgagagcggcatcaggtgcttcgagcgatttttcaaagccgtc
aatatcaaggagggcaagctgaagaccaagaggagatcgatcctgacggaggatccggat
ttgatcggtatcgactatttgtggaaggtggtgacgttgtgttctgatgatatcgctgca
agagcgatcgaactgttgagggaagttagtacgaacctcggtccgaagctcttacaatcg
aggatcgattttcacgaccagtacattggcgaatgtttcgatagattgagggcccactac
gataccatcaccattctgcagaaagaagttaccgaaaaggaggtggagagtagcggcata
ataaacaggatcaaagccgaggctattaagatgtgcagggtgatgaaggtgatgcacgag
tacatcagcgagtgggataacgcttttataggagaaagaaaaatattgcctctgcacagg
gcgtgttatggcaagcatttggcgttaattattagattttcgagcgtaaacaggcaagtc
gaggacattgaacttcacactcattcaaatgacacgcttggctccttgaggaaatccatt
ttgaggcgcatcaaacctggggtccactgcaaattggatctgtacgttaacggggatact
ttagatccagccgatgataggaagttgttgtgtcaaatccccatccgagataaaacgatg
atttcagccaaagttatccaaataaattcgaacatggcatcctcccaagacagcagttcc
gatagctccacatcatccccccagcacctctacgacggaccgaacatagaagccgagtac
ttcttaccgggagtgttgatgtcgcaaaatccgatgtacgcagaatttttctgtcagctg
atgaccctgggcagtcagctggaattttcgccgttgcggaattgcggttacgctctcctg
aaactgatgccttgcgatgtcgccacaatggagaagttcaagaaccgtttcagtctcagc
gagcaaaacatcacgatggacagtgtgttcttcagtgcttcccctgccgaggtattatat
aacttggaagtgttgtatgcaatgttgatgcctgccatggacactctatcggacaagaca
tacgagttccagtacagtttcatcacatcgggagaagctcatatattcttggagatgttg
acgaagaacaacttcatgtccaccgccgatagtataacgagacgttcagcatatctggtg
gtattgaagatatgcaagttaatcctaacgtccgtggcccacgtattggtacgattgagc
gaagaccataccccgcccgaaaacgagtcatcaaacgaaaacaccacgacaccggggatg
tatttgaagcaggcgttgaggtctgtacctggacactcagattttctccttcgtcaagta
tctatgaaactgtcacagggcctcgcgcaattgatggtggccgagacgggcaacaccgga
caggcgcaagccctgttcagccaggccctgaattgggaattgccagatttagccacgact
ctagccctggttcgcctggtatgggcggccagtagcgataatctgggatcgttgaattcc
tcccctgagactcttcattcgttgtcgaatccgttaaaccaaagaatgcccgtcgaccta
gattgcgaggatattttgctttgtaaggaagcccttgaattattaagcgctgccgtggtt
ttgaaccccagcagtttgaaacatttgtatcaagataattggtggccttactttatcaca
gatttggttctattaaatcctagttgtgcagttcgtgtagctgcagctgaacagttaata
gtaatatgtacctgtggtgctgctagtcgtctagctttagaattaattatgcctttacta
ttctctctactagatacaatggtaatagataatgcaaacaattctcacgagttctttcag
ctcttatctcgattagtgagtgttgcttatctaacaggctgtcctttgaataatgcggca
gttctgtttgcaaacgaggtagcgtggctgaagaaggcccgtgataagaacgaggttctc
atcgagggacacctgggcctggccaaggaactgctcagttttatgccgctggaccagaag
tgcgagttggggagcgaggaatcaggcaacctcatccgcgaactgttagaggacttcctg
ttccccgccagcaagttacagttacagctcagcaaaacgaagcagctgggcgaggacccg
gctatccctatatgcgacaccccgcaaacccaagctgcagcattcgacctgctcatctcg
ttgtgcgttaactgcgtaccgaattacaagcaactcgtctcgatgctgacggagatgttt
tattcagatccgagcaccgcaatcggcgattgggactatctgcccgcagtcggtccacgg
cccttccgaggctttgtcggattgaaaaacgcaggagccacctgttacatgaattccgtg
ttgcagcaactctatatggtagataacataaaggaaggtattttagccgcggaaggagca
gcgacggatccaaatgaagattttacaggggaggaacggatagatttagatatagattgt
aatgatgataagaactgtattgatgacaatagaaaagattataatgtagggattttgaaa
caggtccaagccatatttggacatttggcttgctccagactacagtattatgtgcctaaa
ggtctttggagacactttaagcttcaaggcgaacctgtgaacctaagggaacaacaagat
gcagtggaattttttatgtcgcttgtagaaagtttggatgaggccttaaagactctaggt
caggagcaaattatgtcgaaaatattgggtggttcctactcagatcaaaaaatatgcaaa
ggctgccctcatagatattccaaagaagaaccctttagtgttataagtgtagatattaga
aaccatagtagcttacccgattcgatggaacaatatgttaaaggagaattgttggaaggc
gccgacgcgtaccattgcgagaaatgcgcaaagaaagtcgttacagttaagaggctttgc
gttaagaaattgccccctgtcctagcgatacaactaaaacgatttgaatatgattttgag
agagtctgtgccattaagtttaacgattatttcgagttccccagagaattagacatggaa
ccctatacagtttctggtttagctaaaattgagggagagattatagactgtgatttagat
cctaacgccaccgagacttgcaccaagtaccgcctttcgggtattgtcgtacattcaggt
caagcatcaggaggacactattattcgtacattaggaatcgagatccttcgggcgacgtt
agatggtacaaattcgacgacggagacgtgtccgaatgtcggatgggcgaagacgaagag
atgaaaatacagtgtttcggcggggagtacatgggcgaagtttttgatcccatgttaaaa
cgtaccacttatcgcaggcagaagagatggtggaatgcttatatgctgttctacacgaga
cttgatgtggaagaagagtcgttagttaaatcgcttaatcaaatgactctgtcgacatca
aaacaagaaacccatctgaagatgcctttagccattgaaaatagtataaggaaacaaaat
attaaatttttacatcatcgaagccagtttaccatcgagtacttttcgttcattagaaag
ctagcgaccagttgtgcccaaactaacattagacacggccagagtctttcgaacgacatg
ctagagcaacagtgtctacttagcgtccaactagtcagtaactttttattccatatcggg
tggcatacgaagaaaaatcttcggggacccgcaatagaatggtgcgacgtactctgttta
caccttagaacatcatccaacatacggacgtggtttggaatgaatatgttgtttaatcac
atgaaccgtttctgtgaatatcttttgggatgtcagagtaacgaagtccggtctgcattt
atcaaaattatcgttttcctggctcacttttcgatcaaggacccaccgtgtccttgtccc
cccgacatcaataaccccgatcccaacgccaccttgagcgatcatattatctgggcttta
ctcgggctgctgcacggtgaagtcagcgagcacagcagacatttgcctaactactgtaca
gtgttccatatgtatgcgaatcaaggaattcaggagaaggcccagttgctgaaactaaat
gttccctatacgtttatgttagttgctttagacgaaggtccaggaccttctatcaagtat
cagtacgctgatataagcaaactcacgcaattagtgtcgtgtctagtccgttgctgcgac
atcagcctgaagtgccagtcgagcaacggtgacgtcctacccaatccctatagagaacca
actgtgcaggactacattatgcctatttcttcacaagcagctgatattttattcaatcga
actagttacgtaaagaaggtgatcgaggatgtaaatttgaccgacgaggcgatcaaacta
ctgcagttctgttcgtgggagaacccccagttctcgaagacggtgctgtcggaactcttg
tggcagatcgcgttcgcctactgtcaggaattgcggcatcacatagagatcctcttgtcg
gtcttgttcatcgaggattcgtggcagtcgcatcggatccacaacgccatcaagggcatc
cccgacgaacgcgagggcttactcgagacgataacccgcgcgaagagccactatcagaag
cgagcgtaccagtgcatcaagtgtttggtagctctgttcactaaatgccatattgctcaa
aacatgcttttgacacagacagatttaagaagggcgtgggcttcagctgtgacatggctt
caagacgaattagaacggaaatacccgccgaattcgcaatacgcttataacacatggtca
ccgccggctcagagtaacgaaagttcgaacggttacttcctggagcgttccaacagcgcc
cggaagactctggaacgagcgctggagctgatgcccgaagctgatcgagccgacgacgaa
ggtgtcgaagacaccgaatctcaagaagaatctgggcagatcgagtcgaccgaagaaaac
ttggagatatgcaatgaaccccagagcccacagcaaaaatccgacatataa
DBGET
integrated database retrieval system
