KEGG   Rhynchophorus ferrugineus (red palm weevil): 143202113
Entry
143202113         CDS       T11283                                 
Symbol
Taf5
Name
(RefSeq) TATA-box binding protein associated factor 5 isoform X1
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
rfg  Rhynchophorus ferrugineus (red palm weevil)
Pathway
rfg03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:rfg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    143202113 (Taf5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rfg03021]
    143202113 (Taf5)
   03036 Chromosome and associated proteins [BR:rfg03036]
    143202113 (Taf5)
Transcription machinery [BR:rfg03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     143202113 (Taf5)
   Coactivators
    SAGA/TFTC/STAGA complex
     143202113 (Taf5)
Chromosome and associated proteins [BR:rfg03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     143202113 (Taf5)
    STAGA complex
     143202113 (Taf5)
    TFTC complex
     143202113 (Taf5)
    SAGA complex
     143202113 (Taf5)
    SLIK complex
     143202113 (Taf5)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 TFIID_NTD2 WD40_Gbeta WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd WDR55 Beta-prop_WDR36-Utp21_1st Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_Aladin ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_WDR41 Beta-prop_SCAP Beta-prop_DCAF4 Beta-prop_WDR19_1st Beta-prop_SPT8 WD40_RFWD3 PEP5_VPS11_N WDR54 Tricorn_2nd Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_WDR35_TULP_N Beta-prop_RSE1_2nd WD40_like
Other DBs
NCBI-GeneID: 143202113
NCBI-ProteinID: XP_076269512
LinkDB
Position
Unknown
AA seq 652 aa
MSGEVDKNQLAAVLQVLKKYNLKGTEELLRKEANFTDDLDQQDSDVSSVLTGYKSDGDPE
TYEVSYLELKRFVENSLDIYKHELGMILYPVLVHMYLELVYNGHTDKAISLMKKFGPEQD
IYYQEDLKRLAMVTKRDHMNGNELTDTFKSNQFILRMSRDTYSLLKRHLHDKKASVLLNI
VQEHLYFDMYEGVARNKTQIDATSGAVGGEAKRQDNKAKVYYGIPKPPDMQILSAPVEDE
EEVPDQDNPDKPKKKKSKKDPLLSKKTKSDPNAPPPDRLPIPDLKDNDKIEKLKALREAS
KRINLGPENLPSCCCYTLLNSNYTVCCAEITEDSSVMAVGFNDSIIKVFTLVPQKLKSMK
SADQLQDVNIDADDVLVRMMDERSGESSRTLCGHGGPVYSVSFSPERTLLLSSSEDTTIR
LWSLQIWTCLVVYKGHMFPVWDVKFSPLGYYFASCSYDRTARLWATDHYQPLRIFAGHFS
DVDCIQFHPNSNYVATGSSDRRVCLWDVTTGNHVRLMTGHKQPIQALAFSICGRFLASAG
TDCSVLIWDLSHGHLVAELTGHEKTIHCLSFSRCGNVLVSGGLDCSIKLWNFTKLTDDTS
SEDVNISHNPEVKTGEDYLLRTFQTKNSPLINLHFTRRNLMIAVAVFDSVPT
NT seq 1959 nt   +upstreamnt  +downstreamnt
atgtcaggtgaagttgataaaaaccaactagcagcggtattacaagttttaaaaaaatat
aatttgaagggaacagaagaattgttaagaaaagaagctaattttactgatgatctcgat
caacaagactcagatgttagtagtgttttaacaggatataaaagtgatggagatcctgaa
acatacgaggtttcttatttagaattgaaaagatttgtagaaaattctttagatatatac
aaacatgaattgggtatgatattatatccagtacttgtccatatgtatcttgaacttgta
tataatggtcatacagataaagctatatctttgatgaaaaaatttggtcctgaacaagat
atttattatcaagaagatttgaaaaggttggccatggtaacaaagcgtgatcatatgaat
ggaaatgagcttacagatacttttaagtcaaatcaatttattttgcgtatgtcaagggat
acatattcattattaaaaaggcacctacatgacaagaaagcttctgttttattaaatatt
gttcaggaacatttatattttgatatgtatgagggtgttgctaggaataaaacacaaata
gatgcaacttcgggtgcggttggaggagaagctaaaagacaggataataaagcaaaagta
tattatggaataccaaaaccacctgatatgcagatattatctgctccagttgaggatgaa
gaagaagtacctgatcaggataacccagataaaccaaaaaagaaaaaatccaaaaaagat
cctttgctttcaaagaaaactaagtctgatccaaatgctcctccacctgataggcttcct
attccagatttaaaagacaatgataaaattgaaaaactcaaggccttaagagaggcctct
aaaagaataaacttaggacctgaaaatcttccttcttgttgttgctatactttattaaac
tcaaactatacagtgtgttgtgccgaaattacagaagattcaagtgtaatggcagtgggt
ttcaatgactctattattaaagtttttacacttgttccgcagaaattgaagtccatgaag
tcagctgatcaactacaagatgtaaatattgatgctgatgatgttttggtgagaatgatg
gatgaaaggtctggtgagagttcacgtacattatgcggccatggcggtcctgtttattca
gtatctttttcaccagaacgtacattattattaagttcatcagaagataccacaattaga
ttatggagtctccaaatttggacatgtcttgtggtatataaaggacatatgtttcctgtt
tgggatgtaaaattttcaccattaggttactattttgcttcatgttcttatgatagaact
gctagactttgggcaacggatcattatcagccacttagaatatttgcaggtcatttttcg
gacgttgattgcatacaatttcacccaaattcaaattatgtggcaacaggttctagtgat
agaagggtgtgcttatgggacgtgacaactggaaatcatgttcgtttgatgactggtcat
aagcagcctatacaggcattggcttttagcatatgtggaagatttttagcatcagctgga
acagattgttctgttttaatatgggatctttcgcatggccacttagtcgcagagcttact
gggcatgagaaaactattcactgtctgtctttcagccgctgtggtaacgtcctggtttct
ggaggattggattgttcaattaaattatggaatttcaccaaactaacagatgatacgagc
tcggaggatgtaaatatatcacataatccggaagttaagaccggagaggattatttgctg
aggactttccaaacaaaaaattcaccattaataaatttgcattttactagaagaaattta
atgattgctgttgctgtttttgattctgttccaacctga

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